RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PPP1R2P1Q96PQ5 205 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 APOL2Q9BQE5 337 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 RALYQ9UKM9 306 aaKnown RBP19.27■□□□□ 0.68
SREBF1-220ENST00000581707 TMPRSS11EQ9UL52 423 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 R3HDM2Q9Y2K5 976 aaKnown RBP19.27■□□□□ 0.68
SREBF1-220ENST00000581707 TCRBV7S2A1N4TA0A589 114 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 PMS2P1A4D2B8 440 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 CHUKO15111 745 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 SNX2O60749 519 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 PPFIA2O75334 1257 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 MTX2O75431 263 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 CPNE6O95741 557 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 ITPKBP27987 946 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 PCBP4P57723 403 aaKnown RBP19.26■□□□□ 0.67
SREBF1-220ENST00000581707 CCDC173Q0VFZ6 552 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 EIF3IQ13347 325 aaKnown RBP19.26■□□□□ 0.67
SREBF1-220ENST00000581707 MAP9Q49MG5 647 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 IYDQ6PHW0 289 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 CRTC3Q6UUV7 619 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 FAM151BQ6UXP7 276 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 USP53Q70EK8 1073 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 RAB11FIP2Q7L804 512 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 SFRP1Q8N474 314 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 FBXO39Q8N4B4 442 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 FAM71DQ8N9W8 422 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 GDAP1Q8TB36 358 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 SLC37A2Q8TED4 501 aa19.26■□□□□ 0.67
SREBF1-220ENST00000581707 GLYATL1P3A0A0U1RQE8 302 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 PLD2O14939 933 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 KMOO15229 486 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 STX7O15400 261 aaKnown RBP19.25■□□□□ 0.67
SREBF1-220ENST00000581707 CDK14O94921 469 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 TNFSF15O95150 251 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 CD1CP29017 333 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 MLLT3P42568 568 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-220ENST00000581707 ABCG1P45844 678 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 FASLGP48023 281 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 CLCNKAP51800 687 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 OLIG2Q13516 323 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 TAF1AQ15573 450 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-220ENST00000581707 CHRNA6Q15825 494 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 CLPPQ16740 277 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-220ENST00000581707 KHDC1Q4VXA5 237 aaKnown RBP19.25■□□□□ 0.67
SREBF1-220ENST00000581707 ARHGEF18Q6ZSZ5 1173 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 TMPRSS9Q7Z410 1059 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 LRRTM4Q86VH4 590 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF248Q8NDW4 579 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 SLC35B2Q8TB61 432 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 BRSK1Q8TDC3 778 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 RDH14Q9HBH5 336 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 KLC4Q9NSK0 619 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 SLC23A2Q9UGH3 650 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 ARL5AQ9Y689 179 aa19.25■□□□□ 0.67
SREBF1-220ENST00000581707 C2orf81A6NN90 581 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A9O60656 530 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 F3P13726 295 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 SLC2A4P14672 509 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF7P17097 686 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A6P19224 532 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 LPOP22079 712 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A1P22309 533 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A4P22310 534 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A3P35503 534 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A5P35504 534 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 TMEM115Q12893 351 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-220ENST00000581707 PTPRCAPQ14761 206 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 INSCQ1MX18 579 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 PARP6Q2NL67 630 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-220ENST00000581707 PHF19Q5T6S3 580 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 SEL1L2Q5TEA6 688 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 SLITRK4Q8IW52 837 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 LRRC8AQ8IWT6 810 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 LRRC45Q96CN5 670 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 NAF1Q96HR8 494 aaKnown RBP19.24■□□□□ 0.67
SREBF1-220ENST00000581707 SLC38A3Q99624 504 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 NUDT22Q9BRQ3 303 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 TMEM121Q9BTD3 319 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 SEMA6CQ9H3T2 930 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 OSGEPL1Q9H4B0 414 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A7Q9HAW7 530 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A10Q9HAW8 530 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 UGT1A8Q9HAW9 530 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 SARS2Q9NP81 518 aaKnown RBP19.24■□□□□ 0.67
SREBF1-220ENST00000581707 KCNK4Q9NYG8 393 aa19.24■□□□□ 0.67
SREBF1-220ENST00000581707 IGHV1OR21-1A0A087WYE8 117 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 A6NCN8 305 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 OR5K4A6NMS3 321 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 CDRT15L2A8MXV6 281 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 ITGA2BP08514 1039 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 HHEXQ03014 270 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 SQSTM1Q13501 440 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 ITGA9Q13797 1035 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 GTF2H3Q13889 308 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 SPARCL1Q14515 664 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 PLA2G4EQ3MJ16 856 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 NKAIN2Q5VXU1 208 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF761Q86XN6 746 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-220ENST00000581707 ZNF547Q8IVP9 402 aa19.23■□□□□ 0.67
SREBF1-220ENST00000581707 KLHDC8BQ8IXV7 354 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms