RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC23A3Q6PIS1 610 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 PRR23BQ6ZRT6 265 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 SDCCAG8Q86SQ7 713 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 LRRC6Q86X45 466 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 ANKMY2Q8IV38 441 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 PIANPQ8IYJ0 282 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 RBFAQ8N0V3 343 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 SLC22A18ASQ8N1D0 253 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 PELI3Q8N2H9 469 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 MREGQ8N565 214 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 OR6P1Q8NGX9 317 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CDKL2Q92772 493 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 KLHDC7BQ96G42 594 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 C9orf72Q96LT7 481 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 WDR92Q96MX6 357 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 COPS8Q99627 209 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 SUDS3Q9H7L9 328 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CAPN10Q9HC96 672 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 C20orf96Q9NUD7 363 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 NINJ2Q9NZG7 142 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 FETUBQ9UGM5 382 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CRLS1Q9UJA2 301 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 TMPRSS11EQ9UL52 423 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CORO1CQ9ULV4 474 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 GPR34Q9UPC5 381 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 DGKBQ9Y6T7 804 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 V9GYY5 206 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 LRP4O75096 1905 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CACNA1EQ15878 2313 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 MYO15AQ9UKN7 3530 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 TP53BP1Q12888 1972 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 PCDH15Q96QU1 1955 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 CCDC78A2IDD5 438 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 H0Y8X5 98 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 CHUKO15111 745 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 RIPK2O43353 540 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 FOXD2O60548 495 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A9O60656 530 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 ERLIN1O75477 346 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 AP2A2O94973 939 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 IVLP07476 585 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 FAM153BP0C7A2 387 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 THEGLP0DJG4 465 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 ZNF7P17097 686 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A6P19224 532 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A1P22309 533 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A4P22310 534 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 RPS3P23396 243 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 MAOBP27338 520 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 SSTR1P30872 391 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A3P35503 534 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A5P35504 534 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 MPLP40238 635 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 BLKP51451 505 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 THOP1P52888 689 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 CLDN2P57739 230 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 NXPH1P58417 271 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 TMPRSS15P98073 1019 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 DBN1Q16643 649 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 FAM153CQ494X1 144 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 TEDDM1Q5T9Z0 273 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 ZNF470Q6ECI4 717 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 TRMT10BQ6PF06 316 aaKnown RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 IL27RAQ6UWB1 636 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 CES3Q6UWW8 571 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 Q6ZSR6 202 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 ARMCX6Q7L4S7 300 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 PTAR1Q7Z6K3 402 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 PARGQ86W56 976 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 SERPINA9Q86WD7 417 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 SDR16C5Q8N3Y7 309 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 DEFB119Q8N690 84 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 OR13H1Q8NG92 308 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 OR56A4Q8NGH8 313 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 CFAP36Q96G28 342 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 LINC00615Q96LM1 132 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 TRIM56Q9BRZ2 755 aaKnown RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 MIR1-1HGQ9H1L0 117 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 ACSS3Q9H6R3 686 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 PPCSQ9HAB8 311 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A7Q9HAW7 530 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A10Q9HAW8 530 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 UGT1A8Q9HAW9 530 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 TMEM74BQ9NUR3 256 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 ZFATQ9P243 1243 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 OR1A2Q9Y585 309 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 PCDHB1Q9Y5F3 818 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 COMMD10Q9Y6G5 202 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-203ENST00000580986 SLCO1B1Q9Y6L6 691 aa10.29□□□□□ -0.76
CCDC47-203ENST00000580986 MUC6Q6W4X9 2439 aa10.28□□□□□ -0.76
CCDC47-203ENST00000580986 A0A087WUV0 522 aaPredicted RBP10.28□□□□□ -0.76
CCDC47-203ENST00000580986 OR51F1A6NGY5 319 aa10.28□□□□□ -0.76
CCDC47-203ENST00000580986 H3BMM5 538 aa10.28□□□□□ -0.76
CCDC47-203ENST00000580986 CCL22O00626 93 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms