RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 A0A1B0GTQ1 180 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 CCDC78A2IDD5 438 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 H3BM21 787 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
SS18-216ENST00000580751 SLC25A14O95258 325 aaPredicted RBP15.37■□□□□ 0.05
SS18-216ENST00000580751 ZNF883P0CG24 379 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 MC4RP32245 332 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 RXRGP48443 463 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 BLKP51451 505 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 XIAPP98170 497 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 PPARDQ03181 441 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ACVR1Q04771 509 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 GPS2Q13227 327 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 NFATC2Q13469 925 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 GPR33Q49SQ1 333 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ATP13A5Q4VNC0 1218 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ENPP7Q6UWV6 458 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 UNC5AQ6ZN44 842 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ANKMY2Q8IV38 441 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 IGDCC3Q8IVU1 814 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 OR13J1Q8NGT2 312 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ZNF398Q8TD17 642 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 BTN2A2Q8WVV5 523 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 SCG3Q8WXD2 468 aaKnown RBP15.37■□□□□ 0.05
SS18-216ENST00000580751 ULK4Q96C45 1275 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 CDKN2AIPNLQ96HQ2 116 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 CYTH2Q99418 400 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ACSS3Q9H6R3 686 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 ASB8Q9H765 288 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 FGF22Q9HCT0 170 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 CHRAC1Q9NRG0 131 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 DNAAF2Q9NVR5 837 aaKnown RBP15.37■□□□□ 0.05
SS18-216ENST00000580751 DNAJC28Q9NX36 388 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 VPS18Q9P253 973 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 CNOT6Q9ULM6 557 aaKnown RBP15.37■□□□□ 0.05
SS18-216ENST00000580751 SLC17A4Q9Y2C5 497 aa15.37■□□□□ 0.05
SS18-216ENST00000580751 TMEM202A6NGA9 273 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 GPR89AB7ZAQ6 455 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 RASGRP1O95267 797 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 ACSL3O95573 720 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 CSF2P04141 144 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 GPR89BP0CG08 455 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 GPX6P59796 221 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 SRP54P61011 504 aaKnown RBP15.36■□□□□ 0.05
SS18-216ENST00000580751 HNRNPKP61978 463 aaKnown RBP eCLIP15.36■□□□□ 0.05
SS18-216ENST00000580751 PRAMEP78395 509 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 IFFO1Q0D2I5 559 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 EIF2B5Q13144 721 aaKnown RBP15.36■□□□□ 0.05
SS18-216ENST00000580751 PEX6Q13608 980 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 CRYMQ14894 314 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 ALG11Q2TAA5 492 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 ANKRD20A4Q4UJ75 823 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 LDLRAP1Q5SW96 308 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 DOK6Q6PKX4 331 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 AFTPHQ6ULP2 937 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 SNX20Q7Z614 316 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 TRIM74Q86UV6 250 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 TDRPQ86YL5 185 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 LMNTD2Q8IXW0 634 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 KIAA2013Q8IYS2 634 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 PHACTR4Q8IZ21 702 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 MPP5Q8N3R9 675 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 RIBC1Q8N443 379 aaPredicted RBP15.36■□□□□ 0.05
SS18-216ENST00000580751 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.36■□□□□ 0.05
SS18-216ENST00000580751 GDAP1Q8TB36 358 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 CDKL2Q92772 493 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 PDXPQ96GD0 296 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 TBATAQ96M53 351 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 ZNF778Q96MU6 729 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 ZCCHC2Q9C0B9 1178 aaKnown RBP15.36■□□□□ 0.05
SS18-216ENST00000580751 RXFP3Q9NSD7 469 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 TREX1Q9NSU2 369 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 APOBEC3BQ9UH17 382 aaKnown RBP15.36■□□□□ 0.05
SS18-216ENST00000580751 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 CRLS1Q9UJA2 301 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 PLAAQ9Y263 795 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 NFS1Q9Y697 457 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 RPS6KL1Q9Y6S9 549 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 DGKBQ9Y6T7 804 aa15.36■□□□□ 0.05
SS18-216ENST00000580751 BPTFQ12830 3046 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 TMEM131Q92545 1883 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 TCRBV9S1A1TA0A576 114 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 PRSS38A1L453 326 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 AGAP14A8MT82 685 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 CCL22O00626 93 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 CDX4O14627 284 aaPredicted RBP15.35■□□□□ 0.05
SS18-216ENST00000580751 OPA1O60313 960 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 PCDHGA12O60330 932 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A9O60656 530 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 ASMTLO95671 621 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 CEACAM5P06731 702 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 JUNDP17535 347 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A6P19224 532 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A1P22309 533 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A4P22310 534 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 EPHA8P29322 1005 aaPredicted RBP15.35■□□□□ 0.05
SS18-216ENST00000580751 SSTR1P30872 391 aa15.35■□□□□ 0.05
SS18-216ENST00000580751 UGT1A3P35503 534 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms