RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 KRT1P04264 644 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 ATP1A1P05023 1023 aaKnown RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 COMTP21964 271 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 PTPN3P26045 913 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 ATP1A2P50993 1020 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 UBE2IP63279 158 aaKnown RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 MC2RQ01718 297 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 CRTC2Q53ET0 693 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 C11orf63Q6NUN7 778 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 MFSD7Q6UXD7 560 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 CHST15Q7LFX5 561 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 TRIM74Q86UV6 250 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 RFX6Q8HWS3 928 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 PLXDC1Q8IUK5 500 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 GPR26Q8NDV2 337 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 AGAP3Q96P47 875 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 FCRL5Q96RD9 977 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 SPATA16Q9BXB7 569 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 RAB33BQ9H082 229 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 TRIT1Q9H3H1 467 aaKnown RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 FOXJ2Q9P0K8 574 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 CPNE7Q9UBL6 633 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 PLEKHM1Q9Y4G2 1056 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 ALG6Q9Y672 507 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 DNMT3AQ9Y6K1 912 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 SETXQ7Z333 2677 aaKnown RBP14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 TENM4Q6N022 2769 aa14.32□□□□□ -0.12
SMARCE1-216ENST00000580419 C9P02748 559 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 CCL4P13236 92 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 PLA2G2AP14555 144 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF8P17098 575 aaPredicted RBP14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 BPIP17213 487 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 HLA-DPA1P20036 260 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 FECHP22830 423 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 ARSDP51689 593 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 MAPK10P53779 464 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 DMPKQ09013 629 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 WASHC5Q12768 1159 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 MAP7Q14244 749 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 GALNT3Q14435 633 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 DCAF12Q5T6F0 453 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 SPOCD1Q6ZMY3 1216 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 MARK2Q7KZI7 788 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 ADGRG6Q86SQ4 1221 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 TC2NQ8N9U0 490 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 P3H4Q92791 437 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 AHCYL2Q96HN2 611 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 RBM41Q96IZ5 413 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 EFHD1Q9BUP0 239 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 GPR63Q9BZJ6 419 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 POT1Q9NUX5 634 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 PCDHGA4Q9Y5G9 962 aa14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 PCYT1BQ9Y5K3 369 aaPredicted RBP14.31□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF106Q9H2Y7 1883 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 BTNL10A8MVZ5 291 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 CST8O60676 142 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 EML2O95834 649 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 PRB1P04280 392 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 ACP5P13686 325 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 VCLP18206 1134 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 PTPN7P35236 360 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 MAGEA1P43355 309 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 TNNT3P45378 269 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 MPP3Q13368 585 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 TGIF1Q15583 401 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 KDELC1Q6UW63 502 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 CEACAM20Q6UY09 585 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 BBS12Q6ZW61 710 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 LRRTM4Q86VH4 590 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 ZFAND4Q86XD8 727 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 NKD1Q969G9 470 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF514Q96K75 400 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 PPP1R2P1Q96PQ5 205 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 ZCCHC2Q9C0B9 1178 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 OR2AG1Q9H205 316 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 ADNPQ9H2P0 1102 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 SMOXQ9NWM0 555 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 SEMA5BQ9P283 1151 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 EPHA6Q9UF33 1036 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 PILRAQ9UKJ1 303 aa14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 TMEM184BQ9Y519 407 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-216ENST00000580419 SEC16AO15027 2179 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 hCG_1818297A0A087WSY0 165 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 APOC4-APOC2K7ER74 178 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 MT-CYBP00156 380 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 APOC2P02655 101 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF7P17097 686 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 MAP4P27816 1152 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 CD68P34810 354 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 UGT1A3P35503 534 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 NKAIN2Q5VXU1 208 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 CYB5D1Q6P9G0 228 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 NPNTQ6UXI9 565 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 TMEM26Q6ZUK4 368 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 SPATA22Q8NHS9 363 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms