RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ART3Q13508 389 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 MAN2A1Q16706 1144 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 CACHD1Q5VU97 1274 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 NAA35Q5VZE5 725 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 RFLNAQ6ZTI6 216 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 TSPAN33Q86UF1 283 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 SCAMP4Q969E2 229 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 ZDHHC12Q96GR4 267 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 CELF6Q96J87 481 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 SLC39A8Q9C0K1 460 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 RAB33BQ9H082 229 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 ILKAPQ9H0C8 392 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 RMI1Q9H9A7 625 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 AGPAT4Q9NRZ5 378 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 PPIL1Q9Y3C6 166 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 PRKAB1Q9Y478 270 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 PCDHGC4Q9Y5F7 938 aa13.64□□□□□ -0.23
CSNK1D-211ENST00000579316 SNX2O60749 519 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 CPNE3O75131 537 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 RAB40ALP0C0E4 278 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 AMD1P17707 334 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 MMP8P22894 467 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 RFC1P35251 1148 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 RENBPP51606 427 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 AIF1P55008 147 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 RSC1A1Q92681 617 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 AGAP2Q99490 1192 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 WASH6PQ9NQA3 447 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 CD84Q9UIB8 345 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 ITGB1BP2Q9UKP3 347 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 FZD10Q9ULW2 581 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 OSGIN2Q9Y236 505 aa13.63□□□□□ -0.23
CSNK1D-211ENST00000579316 MDC1Q14676 2089 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 PES1O00541 588 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 ASMTLO95671 621 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 FOLR1P15328 257 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 ZNF165P49910 485 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 ACY1Q03154 408 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 IL10RBQ08334 325 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 TRAF2Q12933 501 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 GPS2Q13227 327 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 ZNF235Q14590 738 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 HSP90AA4PQ58FG1 418 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 TMCO4Q5TGY1 634 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 LYPLAL1Q5VWZ2 237 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 DPY19L2P1Q6NXN4 242 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 Q6ZS92 163 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 USP45Q70EL2 814 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 NOP9Q86U38 636 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 KCNMB4Q86W47 210 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 ARHGAP12Q8IWW6 846 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 UBXN4Q92575 508 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 MR1Q95460 341 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 NUDCD1Q96RS6 583 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 TUBGCP2Q9BSJ2 902 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 SP110Q9HB58 689 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 SCHIP1Q9P0W5 487 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 TCFL5Q9UL49 500 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 SNX7Q9UNH6 387 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 SEC16AO15027 2179 aa13.62□□□□□ -0.23
CSNK1D-211ENST00000579316 PGLSO95336 258 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 VIPP01282 170 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 JCHAINP01591 159 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 ATP1A1P05023 1023 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 ALPPP05187 535 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 STSP08842 583 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 HSPA9P38646 679 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 SLC19A1P41440 591 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 GSCP56915 257 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 TPI1P60174 286 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 TPM4P67936 248 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 PTPRRQ15256 657 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 CDKAL1Q5VV42 579 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 LRRC66Q68CR7 880 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 FAM92BQ6ZTR7 304 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 CUZD1Q86UP6 607 aa13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 ENDOVQ8N8Q3 282 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 SIDT2Q8NBJ9 832 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 ZNF514Q96K75 400 aaPredicted RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 RIOK2Q9BVS4 552 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-211ENST00000579316 NLNQ9BYT8 704 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms