RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GPR1P46091 355 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 WNT3AP56704 352 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 NFKB2Q00653 900 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 KLF1Q13351 362 aaPredicted RBP15.89■□□□□ 0.13
VAPA-204ENST00000577901 MPP3Q13368 585 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 PRPSAP1Q14558 356 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 C16orf72Q14CZ0 275 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 ZNF765Q7L2R6 523 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 PIM3Q86V86 326 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 DTX1Q86Y01 620 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 PPP1R2P1Q96PQ5 205 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 CARS2Q9HA77 564 aaKnown RBP15.89■□□□□ 0.13
VAPA-204ENST00000577901 ZFYVE1Q9HBF4 777 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 RDH14Q9HBH5 336 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 PHPT1Q9NRX4 125 aaPredicted RBP15.89■□□□□ 0.13
VAPA-204ENST00000577901 SPATS2LQ9NUQ6 558 aaKnown RBP15.89■□□□□ 0.13
VAPA-204ENST00000577901 PKD2L2Q9NZM6 624 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 AKAP7Q9P0M2 348 aaPredicted RBP15.89■□□□□ 0.13
VAPA-204ENST00000577901 IL17BQ9UHF5 180 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 CD84Q9UIB8 345 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 SCN8AQ9UQD0 1980 aa15.89■□□□□ 0.13
VAPA-204ENST00000577901 A0A0U1RQS6 177 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 LOC285095A0A1B0GVY8 99 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 RHPN2P1A8MT19 583 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 FGF1P05230 155 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 MYCLP1P12525 358 aaPredicted RBP15.88■□□□□ 0.13
VAPA-204ENST00000577901 MAZP56270 477 aaKnown RBP15.88■□□□□ 0.13
VAPA-204ENST00000577901 OR1D5P58170 312 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 CYP4F2P78329 520 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 TBR1Q16650 682 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 AMZ1Q400G9 498 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 ANKRD20A2Q5SQ80 823 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 ANKRD20A1Q5TYW2 823 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 TMEM164Q5U3C3 297 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 ANKRD20A3Q5VUR7 823 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 GPBAR1Q8TDU6 330 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 ZDHHC1Q8WTX9 485 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 FSD1LQ9BXM9 530 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 TEX101Q9BY14 249 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 FRMD8P1Q9BZ68 369 aaPredicted RBP15.88■□□□□ 0.13
VAPA-204ENST00000577901 B3GNT4Q9C0J1 378 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 ABCG8Q9H221 673 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 GBA3Q9H227 469 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 CARD9Q9H257 536 aa15.88■□□□□ 0.13
VAPA-204ENST00000577901 SUDS3Q9H7L9 328 aaPredicted RBP15.88■□□□□ 0.13
VAPA-204ENST00000577901 AAR2Q9Y312 384 aaKnown RBP15.88■□□□□ 0.13
VAPA-204ENST00000577901 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.87■□□□□ 0.13
VAPA-204ENST00000577901 TERTO14746 1132 aaKnown RBP15.87■□□□□ 0.13
VAPA-204ENST00000577901 ZSCAN12O43309 604 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 CCL4P13236 92 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 ALDH4A1P30038 563 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 SPINT3P49223 89 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 GEMP55040 296 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 KDELC1Q6UW63 502 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 ATG14Q6ZNE5 492 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 RFLNAQ6ZTI6 216 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 ZNF438Q7Z4V0 828 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 HEATR4Q86WZ0 1026 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 C17orf82Q86X59 251 aaPredicted RBP15.87■□□□□ 0.13
VAPA-204ENST00000577901 NRROSQ86YC3 692 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
VAPA-204ENST00000577901 IPMKQ8NFU5 416 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 LRRC45Q96CN5 670 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 OXNAD1Q96HP4 312 aaPredicted RBP15.87■□□□□ 0.13
VAPA-204ENST00000577901 SPATA13Q96N96 652 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 NUDT22Q9BRQ3 303 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 GSDMCQ9BYG8 508 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 GPR63Q9BZJ6 419 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 FAM83DQ9H4H8 585 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 RAD18Q9NS91 495 aa15.87■□□□□ 0.13
VAPA-204ENST00000577901 UBR5O95071 2799 aaPredicted RBP15.87■□□□□ 0.13
VAPA-204ENST00000577901 TCRBV7S2A1N4TA0A589 114 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 C5orf60A6NFR6 353 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 F5H423 210 aaPredicted RBP15.86■□□□□ 0.13
VAPA-204ENST00000577901 STMND1H3BQB6 276 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 ZW10O43264 779 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 SUV39H1O43463 412 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 ECEL1O95672 775 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 CEACAM5P06731 702 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 HLA-DPA1P20036 260 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 GNPDA1P46926 289 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 CDK3Q00526 305 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 ILF3Q12906 894 aaKnown RBP eCLIP15.86■□□□□ 0.13
VAPA-204ENST00000577901 NR1D2Q14995 579 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 CLPPQ16740 277 aaPredicted RBP15.86■□□□□ 0.13
VAPA-204ENST00000577901 ADAMTSL4Q6UY14 1074 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 ZNF574Q6ZN55 896 aaPredicted RBP15.86■□□□□ 0.13
VAPA-204ENST00000577901 LYSMD3Q7Z3D4 306 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 SLC25A41Q8N5S1 370 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 RCBTB1Q8NDN9 531 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 SLC35B2Q8TB61 432 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 CCDC110Q8TBZ0 833 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 JPH3Q8WXH2 748 aaPredicted RBP15.86■□□□□ 0.13
VAPA-204ENST00000577901 SCAMP4Q969E2 229 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 MRGPRX2Q96LB1 330 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 RIOK2Q9BVS4 552 aaKnown RBP15.86■□□□□ 0.13
VAPA-204ENST00000577901 FRMD8Q9BZ67 464 aaPredicted RBP15.86■□□□□ 0.13
VAPA-204ENST00000577901 CDH19Q9H159 772 aa15.86■□□□□ 0.13
VAPA-204ENST00000577901 TRABDQ9H4I3 376 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms