RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CHD2O14647 1828 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 BAZ2BQ9UIF8 2168 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1B0GTH6 734 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 A6NL46 340 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 AIM2O14862 343 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 GRID2O43424 1007 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CILPO75339 1184 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 IPO13O94829 963 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ALBP02768 609 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SRPRAP08240 638 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LTA4HP09960 611 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SNHG28P0DPA3 235 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 HNRNPA2B1P22626 353 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CST5P28325 142 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RBL1P28749 1068 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CD6P30203 668 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SHMT2P34897 504 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 UGT1A5P35504 534 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FEN1P39748 380 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NSG1P42857 185 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CRATP43155 626 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CCNHP51946 323 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ARSFP54793 590 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 INHBCP55103 352 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CDH13P55290 713 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DEFB103AP81534 67 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CRYMQ14894 314 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LARS2Q15031 903 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NCF4Q15080 339 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 HSF5Q4G112 596 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ANXA8L1Q5VT79 327 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM198Q66K66 360 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SEL1L3Q68CR1 1132 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SHQ1Q6PI26 577 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TMPPEQ6ZT21 453 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 BTN2A1Q7KYR7 527 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PRICKLE2Q7Z3G6 844 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TAC4Q86UU9 113 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM126BQ8IXS8 530 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 C4orf33Q8N1A6 199 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 GALNT15Q8N3T1 639 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SH2D3CQ8N5H7 860 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZBTB2Q8N680 514 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 EID2Q8N6I1 236 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RTL3Q8N8U3 475 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC43A3Q8NBI5 491 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 AGBL5Q8NDL9 886 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZSWIM2Q8NEG5 633 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 OR5L2Q8NGL0 311 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 STK32AQ8WU08 396 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 STYXQ8WUJ0 223 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CKAP2Q8WWK9 683 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC9A6Q92581 669 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FGF13Q92913 245 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 HDAC10Q969S8 669 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC39Q96DD0 335 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAXDC2Q96IV6 333 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PPP3R2Q96LZ3 170 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KLF6Q99612 283 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM120AQ9BXJ8 343 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SMG9Q9H0W8 520 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ABCG8Q9H221 673 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ADNPQ9H2P0 1102 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NOL6Q9H6R4 1146 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MLXIPLQ9NP71 852 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ITM2CQ9NQX7 267 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TAS2R14Q9NYV8 317 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM216Q9P0N5 145 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF624Q9P2J8 865 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MARCOQ9UEW3 520 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 VPS4AQ9UN37 437 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CORO2BQ9UQ03 480 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNK6Q9Y257 313 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RUVBL1Q9Y265 456 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLIT3O75094 1523 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NRAPQ86VF7 1730 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 C2orf71A6NGG8 1288 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CAPN8A6NHC0 703 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 TISP43B9A030 160 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 DCLK1O15075 740 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 SDC3O75056 442 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 POP7O75817 140 aaKnown RBP2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2B3O76000 313 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ADRB2P07550 413 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNE1P15382 129 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 GOT1P17174 413 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CD72P21854 359 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CCND1P24385 295 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 PSMB4P28070 264 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CD38P28907 300 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPS25P82663 173 aaKnown RBP2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF33AQ06730 810 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 NR1D2Q14995 579 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CST6Q15828 149 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CPSF6Q16630 551 aaKnown RBP eCLIP2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 GPR33Q49SQ1 333 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 VWA2Q5GFL6 755 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms