RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ZBTB6Q15916 424 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 UNC5AQ6ZN44 842 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 BBS12Q6ZW61 710 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 NIM1KQ8IY84 436 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZNF615Q8N8J6 731 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 GDPD1Q8N9F7 314 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 DCAF4Q8WV16 495 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 RDH12Q96NR8 316 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 COL21A1Q96P44 957 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 TREX2Q9BQ50 279 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 MRPL57Q9BQC6 102 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 TRMOQ9BU70 441 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 NUSAP1Q9BXS6 441 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 PRKD2Q9BZL6 878 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZNF436Q9C0F3 470 aaPredicted RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 RAVER2Q9HCJ3 691 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 NIT2Q9NQR4 276 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ZNF69Q9UC07 566 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 ENPP5Q9UJA9 477 aa4.4□□□□□ -1.7
CDH8-205ENST00000577730 FARSAQ9Y285 508 aaKnown RBP4.4□□□□□ -1.7
CDH8-205ENST00000577730 hCG_1818297A0A087WSY0 165 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 DCAF8L1A6NGE4 600 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 T-ENOLP0DO92 83 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 CHMP24386 653 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 PIK3CBP42338 1070 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ZNF235Q14590 738 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 KCTD2Q14681 263 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 CYP1B1Q16678 543 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 GPAT3Q53EU6 434 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 GCNT7Q6ZNI0 430 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 DSG4Q86SJ6 1040 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 RAVER1Q8IY67 606 aaKnown RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 CADM3Q8N126 398 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 C7orf43Q8WVR3 580 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 HTR3CQ8WXA8 447 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 TMBIM1Q969X1 311 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 C18orf25Q96B23 403 aaPredicted RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 C12orf57Q99622 126 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ABCG8Q9H221 673 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 SEMA4BQ9NPR2 832 aaPredicted RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 INIPQ9NRY2 104 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 UPB1Q9UBR1 384 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 TRHDEQ9UKU6 1024 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 USP17L10C9JJH3 530 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 SEC22BO75396 215 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 NCAM1P13591 858 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 CHRM3P20309 590 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 MAOBP27338 520 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 DCKP27707 260 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ANXA11P50995 505 aaKnown RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 CTBP2P56545 445 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 CHAF1BQ13112 559 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 GRAPQ13588 217 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 CRY1Q16526 586 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 VPS26BQ4G0F5 336 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 SETMARQ53H47 684 aaPredicted RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 PCID2Q5JVF3 399 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ZCCHC12Q6PEW1 402 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 DPPA2Q7Z7J5 298 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 SLFN11Q7Z7L1 901 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 TNS4Q8IZW8 715 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ANKFN1Q8N957 763 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 NXPE2Q96DL1 559 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 LGALS12Q96DT0 336 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 CERS2Q96G23 380 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 PNMA5Q96PV4 448 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ACOX2Q99424 681 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 POLR3FQ9H1D9 316 aaPredicted RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 GPN2Q9H9Y4 310 aaPredicted RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 DCP1AQ9NPI6 582 aaPredicted RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 PRDM8Q9NQV8 689 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 KCNH7Q9NS40 1196 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 GGA3Q9NZ52 723 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 PTTG3PQ9NZH4 202 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 NR2E1Q9Y466 385 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 MFHAS1Q9Y4C4 1052 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 AGAP5A6NIR3 686 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ASB14A6NK59 587 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 MEN1O00255 615 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 HMGB3O15347 200 aaKnown RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 DHX15O43143 795 aaKnown RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 SERPINA3P01011 423 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 MBP02144 154 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ITGB1P05556 798 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 NCK1P16333 377 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 IFNGR2P38484 337 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 DDOSTP39656 456 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 OMPP47874 163 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 FNTBP49356 437 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ERVFC1P60507 584 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 PSMA6P60900 246 aaKnown RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 DUOXA2Q1HG44 320 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 AVPI1Q5T686 147 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 FAM205BPQ63HN1 556 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 EIF5AL1Q6IS14 154 aaKnown RBP4.4□□□□□ -1.71
CDH8-205ENST00000577730 RAB11FIP2Q7L804 512 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ZNF720Q7Z2F6 126 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 TSPAN33Q86UF1 283 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 PTGR2Q8N8N7 351 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms