RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 NAGSQ8N159 534 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 ZNF398Q8TD17 642 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 PATE1Q8WXA2 126 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 OSBPL9Q96SU4 736 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 NAP1L3Q99457 506 aaPredicted RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 ZCCHC2Q9C0B9 1178 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 LRIT1Q9P2V4 623 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 RNF215Q9Y6U7 377 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 CACNA1BQ00975 2339 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 USP24Q9UPU5 2620 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 PGRMC1O00264 195 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 CHUKO15111 745 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 LDB2O43679 373 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 NUDT21O43809 227 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 SRP72O76094 671 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 GAS8O95995 478 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 PROS1P07225 676 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 APRTP07741 180 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCDC173Q0VFZ6 552 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 CAMK2BQ13554 666 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 INSCQ1MX18 579 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 GPRC6AQ5T6X5 926 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 TRAPPC5Q8IUR0 188 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 CACTIN-AS1Q8N1I8 211 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 ARL14Q8N4G2 192 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 Q8N9G6 341 aaPredicted RBP20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 DDHD1Q8NEL9 900 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 WDR48Q8TAF3 677 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 COG1Q8WTW3 980 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 DNAJC1Q96KC8 554 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 AP1M1Q9BXS5 423 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 OSGEPL1Q9H4B0 414 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 ASB8Q9H765 288 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 SMOXQ9NWM0 555 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 SMARCAL1Q9NZC9 954 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 TTC7AQ9ULT0 858 aaPredicted RBP20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 PLXNB3Q9ULL4 1909 aa20.45■□□□□ 0.86
HCFC1R1-208ENST00000575214 FRYQ5TBA9 3013 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 IGF2RP11717 2491 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 TRABD2BA6NFA1 517 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 RHPN2P1A8MT19 583 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCL22O00626 93 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 KMOO15229 486 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 CASC3O15234 703 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 SNX2O60749 519 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 SUN1O94901 812 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 AKT1P31749 480 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 CA5AP35218 305 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 BASP1P80723 227 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 SPIDRQ14159 915 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 C4orf22Q6V702 233 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 RBM44Q6ZP01 1051 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 C17orf82Q86X59 251 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCNJLQ8IV13 435 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 MAGOHBQ96A72 148 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 KLC4Q9NSK0 619 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 CRLS1Q9UJA2 301 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 SNX12Q9UMY4 172 aa20.44■□□□□ 0.86
HCFC1R1-208ENST00000575214 ASXL3Q9C0F0 2248 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 TRBV23OR9-2A0A075B6M9 112 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 TMEM8BA6NDV4 472 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 CSO75390 466 aaKnown RBP20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 TCEA3O75764 348 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 RPLP0P05388 317 aaKnown RBP20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 PNLIPP16233 465 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 MSH3P20585 1137 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 ITGALP20701 1170 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 GRIA1P42261 906 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCL7P80098 99 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 XIAPP98170 497 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 NFATC2Q13469 925 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 ZCCHC14Q8WYQ9 949 aaKnown RBP20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 C19orf43Q9BQ61 176 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 TBC1D29Q9UFV1 150 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 DNAJC16Q9Y2G8 782 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 SLC30A1Q9Y6M5 507 aa20.43■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCDC78A2IDD5 438 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 EML2O95834 649 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 ZNF7P17097 686 aaPredicted RBP20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 MC4RP32245 332 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 GNG11P61952 73 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 TRIP13Q15645 432 aaPredicted RBP20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCDC38Q502W7 563 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 SPRED1Q7Z699 444 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 ZNF547Q8IVP9 402 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 SLC37A2Q8TED4 501 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 STYXQ8WUJ0 223 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 ULK4Q96C45 1275 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 GFM1Q96RP9 751 aaKnown RBP20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 TIMM29Q9BSF4 260 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 LRRN3Q9H3W5 708 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 CCDC86Q9H6F5 360 aaKnown RBP20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 NLE1Q9NVX2 485 aaPredicted RBP20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 SLC23A2Q9UGH3 650 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 PCDHB1Q9Y5F3 818 aa20.42■□□□□ 0.86
HCFC1R1-208ENST00000575214 A0A1W2PQM1 296 aa20.41■□□□□ 0.86
HCFC1R1-208ENST00000575214 NTN3O00634 580 aaPredicted RBP20.41■□□□□ 0.86
HCFC1R1-208ENST00000575214 SLC2A4P14672 509 aa20.41■□□□□ 0.86
HCFC1R1-208ENST00000575214 VPS41P49754 854 aa20.41■□□□□ 0.86
HCFC1R1-208ENST00000575214 CLCNKAP51800 687 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms