RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 FAM83HQ6ZRV2 1179 aaPredicted RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 MARK2Q7KZI7 788 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 PHYKPLQ8IUZ5 450 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 PIANPQ8IYJ0 282 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
SMG6-216ENST00000575176 PAF1Q8N7H5 531 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 RASGEF1AQ8N9B8 481 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 OR4K2Q8NGD2 314 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CCHCR1Q8TD31 782 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 BRSK1Q8TDC3 778 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 SLC37A2Q8TED4 501 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 NAT6Q93015 286 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 MS4A14Q96JA4 679 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 DNAJC1Q96KC8 554 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 ZNF778Q96MU6 729 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ALS2CR12Q96Q35 445 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 SRPK1Q96SB4 655 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 SPATA16Q9BXB7 569 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 FSD1LQ9BXM9 530 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 GPR63Q9BZJ6 419 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A7Q9HAW7 530 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A10Q9HAW8 530 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 UGT1A8Q9HAW9 530 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ETNK1Q9HBU6 452 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CASS4Q9NQ75 786 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 GOLGA6AQ9NYA3 693 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 NCKIPSDQ9NZQ3 722 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 PADI4Q9UM07 663 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 CLCA2Q9UQC9 943 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 ZKSCAN5Q9Y2L8 839 aa8.57□□□□□ -1.04
SMG6-216ENST00000575176 AAR2Q9Y312 384 aaKnown RBP8.57□□□□□ -1.04
SMG6-216ENST00000575176 GLYATL1P3A0A0U1RQE8 302 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 TCRBV7S3A2A0A539 114 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 CPED1A4D0V7 1026 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 TMEM8BA6NDV4 472 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GOLGA6L9A6NEM1 432 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 TRABD2BA6NFA1 517 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GPR89AB7ZAQ6 455 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 PDE2AO00408 941 aaPredicted RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 B4GAT1O43505 415 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 CSO75390 466 aaKnown RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 TCEA3O75764 348 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ZNF189O75820 626 aaPredicted RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 TMEM63AO94886 807 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GPR89BP0CG08 455 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ACP5P13686 325 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 CTSEP14091 401 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 PNLIPP16233 465 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GLB1P16278 677 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 FOXN2P32314 431 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ACTR1BP42025 376 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 MAGEA6P43360 314 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 KCNJ1P48048 391 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 CDKN1CP49918 316 aaPredicted RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 ACTR1AP61163 376 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ZFP36L1Q07352 338 aaKnown RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 DMPKQ09013 629 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ILF3Q12906 894 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG6-216ENST00000575176 NFATC2Q13469 925 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 SNX1Q13596 522 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 CCDC157Q569K6 752 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GPRC6AQ5T6X5 926 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ZNF574Q6ZN55 896 aaPredicted RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 ARHGEF18Q6ZSZ5 1173 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 TAF8Q7Z7C8 310 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GALNT13Q8IUC8 556 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ARL14Q8N4G2 192 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 TAB3Q8N5C8 712 aaPredicted RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 FAM46DQ8NEK8 389 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ZDHHC1Q8WTX9 485 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ZCCHC14Q8WYQ9 949 aaKnown RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 TIMM29Q9BSF4 260 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 GSDMCQ9BYG8 508 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 SUDS3Q9H7L9 328 aaPredicted RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 LRRC40Q9H9A6 602 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 RMI1Q9H9A7 625 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 EIF2B3Q9NR50 452 aaKnown RBP8.56□□□□□ -1.04
SMG6-216ENST00000575176 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG6-216ENST00000575176 OGFRQ9NZT2 677 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ZMIZ1Q9ULJ6 1067 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 KCNK6Q9Y257 313 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
SMG6-216ENST00000575176 ATRXP46100 2492 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 SRRM3A6NNA2 597 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 ZNF185O15231 689 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 TP73O15350 636 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 GRID2O43424 1007 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 VEGFDO43915 354 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 PPFIA2O75334 1257 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 SRP72O76094 671 aaKnown RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 SLC25A14O95258 325 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 TPH1P17752 444 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 LPOP22079 712 aaPredicted RBP8.55□□□□□ -1.04
SMG6-216ENST00000575176 ARNTP27540 789 aa8.55□□□□□ -1.04
SMG6-216ENST00000575176 CCKBRP32239 447 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms