RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PRMT7Q9NVM4 692 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GMIPQ9P107 970 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GINS2Q9Y248 185 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 MAGED1Q9Y5V3 778 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TDRD15B5MCY1 1934 aaKnown RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 A0A1W2PQ72 361 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 MYO1GB0I1T2 1018 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 EEF2KO00418 725 aaKnown RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 AREL1O15033 823 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ICMTO60725 284 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ANGPTL1O95841 491 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GSTM2P28161 218 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 NMBRP28336 390 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 SHMT2P34897 504 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ATP6V0D1P61421 351 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 CREB5Q02930 508 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 C6orf141Q5SZD1 244 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GLYATQ6IB77 296 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 CYS1Q717R9 158 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 RASAL3Q86YV0 1011 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ZNF540Q8NDQ6 660 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ARNTL2Q8WYA1 636 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 C19orf60Q96EN9 201 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 HSFY1Q96LI6 401 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 ZIC5Q96T25 663 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 MRPL57Q9BQC6 102 aaKnown RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 PRRG3Q9BZD7 231 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 OR2B2Q9GZK3 357 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 RNF39Q9H2S5 420 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 GBA2Q9HCG7 927 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 PAQR5Q9NXK6 330 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TMEM181Q9P2C4 612 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC40-212ENST00000574799 TPRKBQ9Y3C4 175 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 CASP8AP2Q9UKL3 1982 aa9.52□□□□□ -0.89
CCDC40-212ENST00000574799 FAM20BO75063 409 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 PGLSO95336 258 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 JCHAINP01591 159 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 MYCLP1P12525 358 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 PAMP19021 973 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 CD40LGP29965 261 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 PPP5CP53041 499 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 GJA9P57773 515 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 C1QTNF8P60827 252 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 RACK1P63244 317 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FOXD4Q12950 439 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 XKR4Q5GH76 650 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 DCP2Q8IU60 420 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 ADGRG5Q8IZF4 528 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 TXNDC5Q8NBS9 432 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 HEXDCQ8WVB3 486 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FAM162AQ96A26 154 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 RTP4Q96DX8 246 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 MYRFLQ96LU7 910 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 TMEM74Q96NL1 305 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 MRPL45Q9BRJ2 306 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 C11orf84Q9BUA3 381 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 THUMPD3Q9BV44 507 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 HOXD1Q9GZZ0 328 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 USE1Q9NZ43 259 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 CPA4Q9UI42 421 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 IPPQ9Y573 584 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SNX8Q9Y5X2 465 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 CCDC154A6NI56 674 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SAGE2PA6NJ88 616 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 CST1P01037 141 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 IL4RP24394 825 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FMO4P31512 558 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FMO3P31513 532 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SERPINH1P50454 418 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 TUBA1BP68363 451 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SLC6A3Q01959 620 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SOX4Q06945 474 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 TOP3AQ13472 1001 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SYT16Q17RD7 645 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FAM45BPQ6NSW5 357 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 ZNF544Q6NX49 715 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 SCIMPQ6UWF3 145 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 TUBA1AQ71U36 451 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 GALNT5Q7Z7M9 940 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 AMER2Q8N7J2 671 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FAM45AQ8TCE6 357 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 STYXQ8WUJ0 223 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 LRRC58Q96CX6 371 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 CSF3RQ99062 836 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 FSD1LQ9BXM9 530 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 ZNF717Q9BY31 904 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-212ENST00000574799 ALG9Q9H6U8 611 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 LRRC4Q9HBW1 653 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 TOR4AQ9NXH8 423 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 ENPP5Q9UJA9 477 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 C3orf18Q9UK00 162 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 PCP4L1A6NKN8 68 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 HACD1B0YJ81 288 aa9.51□□□□□ -0.89
CCDC40-212ENST00000574799 ZW10O43264 779 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms