RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 GLDNQ6ZMI3 551 aaPredicted RBP4.56□□□□□ -1.68
CDC27-216ENST00000574304 PLEKHM3Q6ZWE6 761 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 ATG9AQ7Z3C6 839 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 FAM72BQ86X60 149 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 PDILTQ8N807 584 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 OR8K5Q8NH50 307 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 ZKSCAN4Q969J2 545 aaPredicted RBP4.56□□□□□ -1.68
CDC27-216ENST00000574304 EGLN2Q96KS0 407 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 C1orf74Q96LT6 269 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 SMC6Q96SB8 1091 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 OLA1Q9NTK5 396 aaKnown RBP4.56□□□□□ -1.68
CDC27-216ENST00000574304 TCP11L1Q9NUJ3 509 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 FAM118AQ9NWS6 357 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 HCFC1R1Q9NWW0 138 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 MTMR10Q9NXD2 777 aa4.56□□□□□ -1.68
CDC27-216ENST00000574304 MARCH4Q9P2E8 410 aaPredicted RBP4.56□□□□□ -1.68
CDC27-216ENST00000574304 A0A1W2PP11 408 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 ERVV-2B6SEH9 535 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 MAP2K7O14733 419 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 SYNGR3O43761 229 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 RNASEH2AO75792 299 aaKnown RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 DDX58O95786 925 aaKnown RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 IGHV4-39P01824 125 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 ZNF23P17027 643 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 CDH2P19022 906 aaPredicted RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 TIMP3P35625 211 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 ARCN1P48444 511 aaKnown RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 GALCP54803 685 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 RPL24P83731 157 aaKnown RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 SREBF2Q12772 1141 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 LRMPQ12912 555 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 RBM39Q14498 530 aaKnown RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 KRT32Q14532 448 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 HAUS3Q68CZ6 603 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 PLA2G4FQ68DD2 849 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 ADSSL1Q8N142 457 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 RASGEF1CQ8N431 466 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 PAF1Q8N7H5 531 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 PHF21AQ96BD5 680 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 SEMA3CQ99985 751 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 TMEM39BQ9GZU3 492 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 MUC13Q9H3R2 512 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 EPB41L5Q9HCM4 733 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 ERRFI1Q9UJM3 462 aaPredicted RBP4.55□□□□□ -1.68
CDC27-216ENST00000574304 MTMR6Q9Y217 621 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 TCF19Q9Y242 345 aa4.55□□□□□ -1.68
CDC27-216ENST00000574304 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 PRSS47A8MTI9 375 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 TMEM178BH3BS89 294 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 SCAMP1O15126 338 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 PRSS1P07477 247 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 LAMP2P13473 410 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 GM2AP17900 193 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 AHRP35869 848 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 GLIPR1P48060 266 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
CDC27-216ENST00000574304 ZSCAN23Q3MJ62 389 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 CCNYL2Q5T2Q4 361 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 ZNF449Q6P9G9 518 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 TSPAN33Q86UF1 283 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 CCDC190Q86UF4 302 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 PM20D2Q8IYS1 436 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 HACE1Q8IYU2 909 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 EMC1Q8N766 993 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 POMGNT1Q8WZA1 660 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 SCRN2Q96FV2 425 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 MPP4Q96JB8 637 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 ST6GAL2Q96JF0 529 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 MAP3K20Q9NYL2 800 aaKnown RBP4.54□□□□□ -1.68
CDC27-216ENST00000574304 KLHL9Q9P2J3 617 aa4.54□□□□□ -1.68
CDC27-216ENST00000574304 CORO1CQ9ULV4 474 aaPredicted RBP4.54□□□□□ -1.68
CDC27-216ENST00000574304 ARHGEF40Q8TER5 1519 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 BUD23O43709 281 aaKnown RBP4.53□□□□□ -1.68
CDC27-216ENST00000574304 HIST1H2ABP04908 130 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 TMEM11P17152 192 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 HIST1H2ADP20671 130 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 NR2F2P24468 414 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 ARL3P36405 182 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 CDKN1AP38936 164 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 EIF4A2Q14240 407 aaKnown RBP4.53□□□□□ -1.68
CDC27-216ENST00000574304 GKAP1Q5VSY0 366 aaPredicted RBP4.53□□□□□ -1.68
CDC27-216ENST00000574304 SNX30Q5VWJ9 437 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 ACSM2BQ68CK6 577 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 FAAH2Q6GMR7 532 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 SARM1Q6SZW1 724 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 Q75L30 129 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 HIST3H2AQ7L7L0 130 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 EPHX4Q8IUS5 362 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 ZBTB8BQ8NAP8 495 aaPredicted RBP4.53□□□□□ -1.68
CDC27-216ENST00000574304 SLC38A9Q8NBW4 561 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 FBXO17Q96EF6 278 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 UPF2Q9HAU5 1272 aaKnown RBP4.53□□□□□ -1.68
CDC27-216ENST00000574304 SMC4Q9NTJ3 1288 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 PRAG1Q86YV5 1406 aa4.53□□□□□ -1.68
CDC27-216ENST00000574304 A0A087X0M5 115 aa4.52□□□□□ -1.69
CDC27-216ENST00000574304 A0A1B0GX30 115 aa4.52□□□□□ -1.69
CDC27-216ENST00000574304 ANKRD66B4E2M5 251 aa4.52□□□□□ -1.69
CDC27-216ENST00000574304 SMAD9O15198 467 aaKnown RBP4.52□□□□□ -1.69
CDC27-216ENST00000574304 OGG1O15527 345 aa4.52□□□□□ -1.69
CDC27-216ENST00000574304 CTSVO60911 334 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms