RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PPIL1Q9Y3C6 166 aa11.78□□□□□ -0.52
NDE1-206ENST00000572967 PKP3Q9Y446 797 aa11.78□□□□□ -0.52
NDE1-206ENST00000572967 CSNK1G3Q9Y6M4 447 aa11.78□□□□□ -0.52
NDE1-206ENST00000572967 V9GYY5 206 aaPredicted RBP11.78□□□□□ -0.52
NDE1-206ENST00000572967 FREM2Q5SZK8 3169 aa11.77□□□□□ -0.52
NDE1-206ENST00000572967 RP1P56715 2156 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 A0A087WV48 116 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 C1orf232A0A0U1RR37 186 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.53
NDE1-206ENST00000572967 USP12O75317 370 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 RECQL5O94762 991 aaPredicted RBP11.77□□□□□ -0.53
NDE1-206ENST00000572967 PRLP01236 227 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 GP1BAP07359 652 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 GSTA2P09210 222 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 PGAM1P18669 254 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ADRA1DP25100 572 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ITPKBP27987 946 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 MAGEA3P43357 314 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 CARSP49589 748 aaKnown RBP11.77□□□□□ -0.53
NDE1-206ENST00000572967 HK3P52790 923 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 CBLBQ13191 982 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 INPP5AQ14642 412 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 RTP5Q14D33 572 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 BRD3Q15059 726 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 TAF1AQ15573 450 aaPredicted RBP11.77□□□□□ -0.53
NDE1-206ENST00000572967 CCDC38Q502W7 563 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 C3orf38Q5JPI3 329 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 CDCP2Q5VXM1 449 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 DENND2CQ68D51 928 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ENPP7Q6UWV6 458 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ZDHHC24Q6UX98 284 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 DPPA4Q7L190 304 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 CCDC25Q86WR0 208 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 CNPY4Q8N129 248 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 PYROXD1Q8WU10 500 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 STAMBPL1Q96FJ0 436 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 APOOQ9BUR5 198 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 BOCQ9BWV1 1114 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 GPR63Q9BZJ6 419 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ABCG4Q9H172 646 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 SUDS3Q9H7L9 328 aaPredicted RBP11.77□□□□□ -0.53
NDE1-206ENST00000572967 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■■■■□ 22.1
NDE1-206ENST00000572967 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 RAB21Q9UL25 225 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 RIMKLBQ9ULI2 386 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ZNF711Q9Y462 761 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 MAD1L1Q9Y6D9 718 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 ACACAQ13085 2346 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 KIF26BQ2KJY2 2108 aa11.77□□□□□ -0.53
NDE1-206ENST00000572967 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 TCRBV7S3A2A0A539 114 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 RGSL1A5PLK6 1076 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 E7ESA3 106 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 LMO7DNF2Z398 122 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 TOR1BO14657 336 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 RASGRP1O95267 797 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 POLBP06746 335 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 PDHA1P08559 390 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 CTSEP14091 401 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 GM2AP17900 193 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 HTR1BP28222 390 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 PHBP35232 272 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 HADHAP40939 763 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 CHRNA4P43681 627 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 VSNL1P62760 191 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
NDE1-206ENST00000572967 MTM1Q13496 603 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 POU6F1Q14863 301 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 ACOX1Q15067 660 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 CNGA3Q16281 694 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 TBC1D25Q3MII6 688 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 DENND5AQ6IQ26 1287 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 LIPIQ6XZB0 460 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 CAND1Q86VP6 1230 aaKnown RBP11.76□□□□□ -0.53
NDE1-206ENST00000572967 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 ZBED8Q8IZ13 594 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 PELI3Q8N2H9 469 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 SNIP1Q8TAD8 396 aaKnown RBP11.76□□□□□ -0.53
NDE1-206ENST00000572967 NUS1Q96E22 293 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
NDE1-206ENST00000572967 TBATAQ96M53 351 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 WDR92Q96MX6 357 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 CCDC3Q9BQI4 270 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 PARD6BQ9BYG5 372 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 ZFYVE1Q9HBF4 777 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 FGF22Q9HCT0 170 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 SAYSD1Q9NPB0 183 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 MRPL40Q9NQ50 206 aaKnown RBP11.76□□□□□ -0.53
NDE1-206ENST00000572967 PKD2L2Q9NZM6 624 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 NCKIPSDQ9NZQ3 722 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 ZC3H7BQ9UGR2 993 aaKnown RBP11.76□□□□□ -0.53
NDE1-206ENST00000572967 TCAF1Q9Y4C2 921 aa11.76□□□□□ -0.53
NDE1-206ENST00000572967 FAM237BA0A1B0GVD1 139 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 PMS2P1A4D2B8 440 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 CCDC151A5D8V7 595 aa11.75□□□□□ -0.53
NDE1-206ENST00000572967 CACNB4O00305 520 aaPredicted RBP11.75□□□□□ -0.53
NDE1-206ENST00000572967 TPP1O14773 563 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms