RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 STAMBPL1Q96FJ0 436 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 TGM7Q96PF1 710 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 OR6C1Q96RD1 312 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 NUP85Q9BW27 656 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 ADGRE3Q9BY15 652 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 NAT10Q9H0A0 1025 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 THAP2Q9H0W7 228 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 OSGEPL1Q9H4B0 414 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZNF768Q9H5H4 540 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZNF624Q9P2J8 865 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 ANAPC7Q9UJX3 599 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 KCND3Q9UK17 655 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 POLHQ9Y253 713 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 SLC30A1Q9Y6M5 507 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 RELNP78509 3460 aa9.73□□□□□ -0.85
TRAPPC1-205ENST00000572656 BLACEA4D250 179 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 GOLGA6L3A6NEY3 463 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 MYO1FO00160 1098 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 CHUKO15111 745 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 KMOO15229 486 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 KATNA1O75449 491 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SPAG6O75602 509 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 RFPL1O75677 317 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 RASSF9O75901 435 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 MTA2O94776 668 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 KIAA0754O94854 1291 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SLC25A14O95258 325 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 NDUFA10O95299 355 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 CYP1A2P05177 515 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 MMP2P08253 660 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 FURINP09958 794 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 FGF5P12034 268 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 MX2P20592 715 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SLC19A1P41440 591 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 CD86P42081 329 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SSR1P43307 286 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 LEPRP48357 1165 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SEPHS1P49903 392 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 PMS2P54278 862 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 MLLT10P55197 1068 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SH3BP2P78314 561 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ATP13A4Q4VNC1 1196 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 TDRD12Q587J7 1177 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZNF569Q5MCW4 686 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZNF648Q5T619 568 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 HGSNATQ68CP4 663 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 PDPK2PQ6A1A2 396 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 PRSS42Q7Z5A4 293 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ADGRG6Q86SQ4 1221 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 TRIM48Q8IWZ4 208 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 KCTD6Q8NC69 237 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 LRRN4Q8WUT4 740 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 EID2BQ96D98 161 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZNF670Q9BS34 389 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZSCAN5AQ9BUG6 496 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SPATA16Q9BXB7 569 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZFYVE1Q9HBF4 777 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 ARFGAP3Q9NP61 516 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 RAD18Q9NS91 495 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 SLC23A2Q9UGH3 650 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 TLK1Q9UKI8 766 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 PADI1Q9ULC6 663 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 PCDHGA6Q9Y5G7 932 aa9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 BZW2Q9Y6E2 419 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-205ENST00000572656 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 PIPSLA2A3N6 862 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CDC14CA4D256 554 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 PDZK1P1A8MUH7 402 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 KIF1CO43896 1103 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CREG1O75629 220 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 JCHAINP01591 159 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 MT-ND3P03897 115 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 KRT7P08729 469 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 ZNF7P17097 686 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CAPZBP47756 277 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 DCDC1P59894 354 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 GBE1Q04446 702 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 TYRO3Q06418 890 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 SLC10A2Q12908 348 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 PDK2Q15119 407 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 INSCQ1MX18 579 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 C4orf17Q53FE4 359 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 FIGNQ5HY92 759 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 AGAP9Q5VTM2 703 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CACHD1Q5VU97 1274 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 ALS2CLQ60I27 953 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CYB5D1Q6P9G0 228 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CRTC3Q6UUV7 619 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 ABRAXAS1Q6UWZ7 409 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 WASH2PQ6VEQ5 465 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 TMEM135Q86UB9 458 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 LRRTM4Q86VH4 590 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 MAP7D3Q8IWC1 876 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 RBM12BQ8IXT5 1001 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 TRAM1L1Q8N609 369 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 PQLC3Q8N755 202 aa9.71□□□□□ -0.86
TRAPPC1-205ENST00000572656 CCNYQ8ND76 341 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms