RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 WDR74Q6RFH5 385 aaPredicted RBP17.88■□□□□ 0.45
CHD3-214ENST00000572579 CRTC3Q6UUV7 619 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 SPOCD1Q6ZMY3 1216 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 TTC30BQ8N4P2 665 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 TRAM1L1Q8N609 369 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 KRT35Q92764 455 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 GLYATL1Q969I3 302 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 OXNAD1Q96HP4 312 aaPredicted RBP17.88■□□□□ 0.45
CHD3-214ENST00000572579 C10orf88Q9H8K7 445 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 BPIFA1Q9NP55 256 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 KLC4Q9NSK0 619 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
CHD3-214ENST00000572579 ZNF624Q9P2J8 865 aaPredicted RBP17.88■□□□□ 0.45
CHD3-214ENST00000572579 CPNE7Q9UBL6 633 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 SLC30A1Q9Y6M5 507 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 TENM4Q6N022 2769 aa17.88■□□□□ 0.45
CHD3-214ENST00000572579 B4E171 279 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 F5H423 210 aaPredicted RBP17.87■□□□□ 0.45
CHD3-214ENST00000572579 PYCARD-AS1I3L0S3 204 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 LCA5LO95447 670 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 BRAFP15056 766 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 ITGB6P18564 788 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A3P35503 534 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 SLC19A1P41440 591 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 TSPAN7P41732 249 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 MAGEA1P43355 309 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 NR2C2P49116 596 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 CLCNKAP51800 687 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 HADHBP55084 474 aaKnown RBP17.87■□□□□ 0.45
CHD3-214ENST00000572579 WNT3AP56704 352 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 SNAP47Q5SQN1 464 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 C11orf96Q7Z7L8 435 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 OR10G6Q8NH81 332 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 NCSTNQ92542 709 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 MRGPRX2Q96LB1 330 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 CTRCQ99895 268 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 GORASP1Q9BQQ3 440 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 IL26Q9NPH9 171 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 SLC39A1Q9NY26 324 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 SDK2Q58EX2 2172 aa17.87■□□□□ 0.45
CHD3-214ENST00000572579 FLNBO75369 2602 aaKnown RBP17.86■□□□□ 0.45
CHD3-214ENST00000572579 hCG_1818297A0A087WSY0 165 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 A0A0A6YYK5 440 aaPredicted RBP17.86■□□□□ 0.45
CHD3-214ENST00000572579 RCCD1A6NED2 376 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 B8ZZF3 427 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 GPR39O43194 453 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 ZW10O43264 779 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 SPOPO43791 374 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 NFKB1P19838 968 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 CD82P27701 267 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 CSTF2P33240 577 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHD3-214ENST00000572579 TBR1Q16650 682 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 PLA2G4EQ3MJ16 856 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 ATP13A5Q4VNC0 1218 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 ZNF569Q5MCW4 686 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 ZC3H18Q86VM9 953 aaKnown RBP17.86■□□□□ 0.45
CHD3-214ENST00000572579 CNGA4Q8IV77 575 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 ZNF567Q8N184 647 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 TFB1MQ8WVM0 346 aaKnown RBP17.86■□□□□ 0.45
CHD3-214ENST00000572579 HAUS1Q96CS2 278 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 DPYSL5Q9BPU6 564 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 ZSCAN5AQ9BUG6 496 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 DDA1Q9BW61 102 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 SLC12A9Q9BXP2 914 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 GPR63Q9BZJ6 419 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 APMAPQ9HDC9 416 aa17.86■□□□□ 0.45
CHD3-214ENST00000572579 AKAP7Q9P0M2 348 aaPredicted RBP17.86■□□□□ 0.45
CHD3-214ENST00000572579 KIR2DS5A0A0G2JLQ3 304 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 A0A0G2JNG1 304 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 STMND1H3BQB6 276 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 KIR2DS3K7RE56 304 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 GAPDHSO14556 408 aaPredicted RBP17.85■□□□□ 0.45
CHD3-214ENST00000572579 PSTPIP1O43586 416 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 TPM1P09493 284 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 GFERP55789 205 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 MC2RQ01718 297 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 PTPRCAPQ14761 206 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 KIR2DS5Q14953 304 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 CLCA4Q14CN2 919 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 SIRPB2Q5JXA9 342 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 TMEM164Q5U3C3 297 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 TIPARPQ7Z3E1 657 aaKnown RBP17.85■□□□□ 0.45
CHD3-214ENST00000572579 SLC9B2Q86UD5 537 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 KATNAL2Q8IYT4 538 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 RTP4Q96DX8 246 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 AHCYL2Q96HN2 611 aaKnown RBP17.85■□□□□ 0.45
CHD3-214ENST00000572579 FAM153AQ9UHL3 310 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 PILRAQ9UKJ1 303 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 WDR37Q9Y2I8 494 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 PCDHB11Q9Y5F2 797 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 PCDHA13Q9Y5I0 950 aa17.85■□□□□ 0.45
CHD3-214ENST00000572579 BUD23O43709 281 aaKnown RBP17.84■□□□□ 0.45
CHD3-214ENST00000572579 DUX1O43812 170 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A9O60656 530 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 FAM87AP0C7U9 286 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 LIFP15018 202 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 ZNF7P17097 686 aaPredicted RBP17.84■□□□□ 0.45
CHD3-214ENST00000572579 XRCC1P18887 633 aaPredicted RBP17.84■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A6P19224 532 aa17.84■□□□□ 0.45
CHD3-214ENST00000572579 UGT1A1P22309 533 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms