RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 LRRC4CQ9HCJ2 640 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 TRIM39Q9HCM9 518 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 DNAJC28Q9NX36 388 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 ZDHHC3Q9NYG2 299 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 NINJ2Q9NZG7 142 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 MARCH4Q9P2E8 410 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 TXNDC16Q9P2K2 825 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 CNOT6Q9ULM6 557 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 OAS3Q9Y6K5 1087 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 ZDBF2Q9HCK1 2354 aa9.35□□□□□ -0.91
NPLOC4-208ENST00000572351 SPTY2D1-AS1A0A0U1RR47 76 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 UBA6A0AVT1 1052 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TMEM202A6NGA9 273 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 GPR89AB7ZAQ6 455 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 F8W8V4 182 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 H3BM21 787 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TNFRSF10CO14798 259 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 VEGFDO43915 354 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ERLIN1O75477 346 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 RASGRP1O95267 797 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TNFP01375 233 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 FAM153BP0C7A2 387 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 GPR89BP0CG08 455 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CTSEP14091 401 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ZNF7P17097 686 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 NSG1P42857 185 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SLC1A2P43004 574 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ARRB1P49407 418 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SRP54P61011 504 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 PPARDQ03181 441 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TMEM115Q12893 351 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 GRIK2Q13002 908 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CTBP1Q13363 440 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 FRG1Q14331 258 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 FZD2Q14332 565 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SEMA3AQ14563 771 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ITIH4Q14624 930 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 FAM153CQ494X1 144 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ZNF542PQ5EBM4 170 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 PRAMEF14Q5SWL7 426 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TPRG1LQ5T0D9 272 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 EMBQ6PCB8 327 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CRTC3Q6UUV7 619 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ADGRG6Q86SQ4 1221 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CILP2Q8IUL8 1156 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 DENND6AQ8IWF6 608 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 PIANPQ8IYJ0 282 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 RBFAQ8N0V3 343 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 OXR1Q8N573 874 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 GPR150Q8NGU9 434 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 UBLCP1Q8WVY7 318 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TSACCQ96A04 125 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TCF12Q99081 682 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SLC13A1Q9BZW2 595 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ZDHHC5Q9C0B5 715 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CLPBQ9H078 707 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SMOC1Q9H4F8 434 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 RMI1Q9H9A7 625 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 CYP4F12Q9HCS2 524 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 FGF22Q9HCT0 170 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 MRPL40Q9NQ50 206 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 FSCN3Q9NQT6 498 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 GPR27Q9NS67 375 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 NSMCE4AQ9NXX6 385 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 VPS18Q9P253 973 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ATXN10Q9UBB4 475 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ZNHIT2Q9UHR6 403 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TMPRSS11EQ9UL52 423 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SLC17A4Q9Y2C5 497 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 GPSM3Q9Y4H4 160 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 SNX11Q9Y5W9 270 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 ATG2BQ96BY7 2078 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 NCOR1O75376 2440 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 TRIOO75962 3097 aa9.34□□□□□ -0.91
NPLOC4-208ENST00000572351 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 TRBV5-4A0A0C4DH59 114 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 PRSS38A1L453 326 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 OR2AG2A6NM03 316 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 AGAP14A8MT82 685 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 ARHGAP33O14559 1287 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 SCAMP1O15126 338 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 GRID2O43424 1007 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 NUAK1O60285 661 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 OR1I1O60431 355 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 AP2A2O94973 939 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 CER1O95813 267 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 CEACAM5P06731 702 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 OR56A5P0C7T3 313 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 ATP1B2P14415 290 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 ZNF8P17098 575 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 JUNDP17535 347 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 CA5AP35218 305 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 CTSKP43235 329 aa9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 EIF3BP55884 814 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-208ENST00000572351 GPX6P59796 221 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms