RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CHMP2BQ9UQN3 213 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 MAGEB16A2A368 324 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 NPIPB15A6NHN6 443 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 C1QTNF3-AMACRE9PGA6 284 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 AURKAO14965 403 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 CSO75390 466 aaKnown RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 ERLIN1O75477 346 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 CTPS1P17812 591 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 RBMS1P29558 406 aaKnown RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 ABL2P42684 1182 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 GPX6P59796 221 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 PPP2CBP62714 309 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 PPP2CAP67775 309 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 UAP1Q16222 522 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 POM121L1PQ3SYA9 428 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 STEAP4Q687X5 459 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 DENND2CQ68D51 928 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 NEK5Q6P3R8 708 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 TRMT10CQ7L0Y3 403 aaKnown RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 FAM174AQ8TBP5 190 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 PYROXD1Q8WU10 500 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 PTCD2Q8WV60 388 aaKnown RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 ANKRD7Q92527 254 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 EID2BQ96D98 161 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 C9orf72Q96LT7 481 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 ZNF778Q96MU6 729 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 SLC46A1Q96NT5 459 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 NAT9Q9BTE0 207 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 DUSP23Q9BVJ7 150 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 TRABDQ9H4I3 376 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
RPAIN-209ENST00000571558 LRRC4CQ9HCJ2 640 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 CHRAC1Q9NRG0 131 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 NLGN3Q9NZ94 848 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 IL17BQ9UHF5 180 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 TCAF1Q9Y4C2 921 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 PCDHGA8Q9Y5G5 932 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 MAD1L1Q9Y6D9 718 aa13.67□□□□□ -0.22
RPAIN-209ENST00000571558 FAM237BA0A1B0GVD1 139 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 AREL1O15033 823 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 SDC3O75056 442 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 TTC4O95801 387 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 NTRK1P04629 796 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 TSHRP16473 764 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PGAM1P18669 254 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 MMP12P39900 470 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 SUOXP51687 545 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PMS2P54278 862 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 SRSF1Q07955 248 aaKnown RBP eCLIP13.66□□□□□ -0.22
RPAIN-209ENST00000571558 TAF1AQ15573 450 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-209ENST00000571558 KYNUQ16719 465 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 LRRC73Q5JTD7 316 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 CFAP58Q5T655 872 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PIP5KL1Q5T9C9 394 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 USP45Q70EL2 814 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
RPAIN-209ENST00000571558 CCNJLQ8IV13 435 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PPHLN1Q8NEY8 458 aaKnown RBP13.66□□□□□ -0.22
RPAIN-209ENST00000571558 BLOC1S5Q8TDH9 187 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PPP1R16AQ96I34 528 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PREBQ9HCU5 417 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 PCDH12Q9NPG4 1184 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 HACD3Q9P035 362 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 ZC3H7BQ9UGR2 993 aaKnown RBP13.66□□□□□ -0.22
RPAIN-209ENST00000571558 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 ZNF711Q9Y462 761 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 ARL5AQ9Y689 179 aa13.66□□□□□ -0.22
RPAIN-209ENST00000571558 A0A0U1RQS6 177 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 ZCWPW2A0A1B0GU75 182 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 HEATR9A2RTY3 570 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 ADRB3P13945 408 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 LHCGRP22888 699 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 NEK3P51956 506 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 ZNF140P52738 457 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-209ENST00000571558 ACVR1Q04771 509 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 CCDC15Q0P6D6 951 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 CNTN1Q12860 1018 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 ANKRD20A4Q4UJ75 823 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 TSTD2Q5T7W7 516 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 AGBL4Q5VU57 503 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 CASC4Q6P4E1 433 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 CRTC1Q6UUV9 634 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 UNC5AQ6ZN44 842 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 CCDC81Q6ZN84 652 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 GLT6D1Q7Z4J2 308 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 TTC7BQ86TV6 843 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 CBARPQ8N350 705 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-209ENST00000571558 TMEM145Q8NBT3 493 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 TTC25Q96NG3 672 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 SRPK1Q96SB4 655 aaKnown RBP13.65□□□□□ -0.22
RPAIN-209ENST00000571558 FAM117AQ9C073 453 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 TREX1Q9NSU2 369 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms