RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 HSD3B7Q9H2F3 369 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 OSGEPL1Q9H4B0 414 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 KLC4Q9NSK0 619 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 RBM22Q9NW64 420 aaKnown RBP eCLIP18.73■□□□□ 0.59
SCARF1-204ENST00000570902 AIPL1Q9NZN9 384 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 OGFRQ9NZT2 677 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 ATXN10Q9UBB4 475 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 TLK1Q9UKI8 766 aa18.73■□□□□ 0.59
SCARF1-204ENST00000570902 USP9XQ93008 2570 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-204ENST00000570902 CDC14CA4D256 554 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 GOLGA6L3A6NEY3 463 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 DDX3XO00571 662 aaKnown RBP eCLIP18.72■□□□□ 0.59
SCARF1-204ENST00000570902 CREG1O75629 220 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 RASSF9O75901 435 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 FURINP09958 794 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 TYRP1P17643 537 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 PRKCIP41743 596 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 SEPHS1P49903 392 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 IHHQ14623 411 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 IFI16Q16666 785 aaKnown RBP18.72■□□□□ 0.59
SCARF1-204ENST00000570902 TXNRD3NBQ6F5E7 133 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 APLFQ8IW19 511 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-204ENST00000570902 ARRDC2Q8TBH0 407 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 SEC14L1Q92503 715 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 LNPEPQ9UIQ6 1025 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 PADI1Q9ULC6 663 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 ADGRG1Q9Y653 693 aa18.72■□□□□ 0.59
SCARF1-204ENST00000570902 PIPSLA2A3N6 862 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 C21orf140B9A014 251 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 MFSD11O43934 449 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 AGFG2O95081 481 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 FGF5P12034 268 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 ZNF8P17098 575 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-204ENST00000570902 CCNCP24863 283 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 CASP14P31944 242 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 SH3BP2P78314 561 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 SLC25A11Q02978 314 aaKnown RBP18.71■□□□□ 0.59
SCARF1-204ENST00000570902 KLHL30Q0D2K2 578 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 DNASE1L3Q13609 305 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCARF1-204ENST00000570902 ZNF569Q5MCW4 686 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 FHL5Q5TD97 284 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 PRSS42Q7Z5A4 293 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 NIPA2Q8N8Q9 360 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 GALNT11Q8NCW6 608 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 MLPHQ9BV36 600 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-204ENST00000570902 ADGRE3Q9BY15 652 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 ISCUQ9H1K1 167 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 OR2AG1Q9H205 316 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 TRIM39Q9HCM9 518 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 IP6K2Q9UHH9 426 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 SLC30A1Q9Y6M5 507 aa18.71■□□□□ 0.59
SCARF1-204ENST00000570902 UTP20O75691 2785 aaKnown RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 TTLL8A6PVC2 850 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 SMTNL1A8MU46 457 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 ANKRD66B4E2M5 251 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 SPAG6O75602 509 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 SLC25A14O95258 325 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 IL4RP24394 825 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 CAPZBP47756 277 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 QPCTQ16769 361 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 INSCQ1MX18 579 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 TDRD12Q587J7 1177 aaKnown RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 PPP1R3BQ86XI6 285 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 RBM12BQ8IXT5 1001 aaKnown RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 ZDHHC12Q96GR4 267 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 ELMO2Q96JJ3 720 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 TSGA13Q96PP4 275 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 BPIFA3Q9BQP9 254 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 ZSCAN5AQ9BUG6 496 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 SPATA16Q9BXB7 569 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 POT1Q9NUX5 634 aa18.7■□□□□ 0.58
SCARF1-204ENST00000570902 SCHIP1Q9P0W5 487 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 PLEKHB1Q9UF11 243 aaPredicted RBP18.7■□□□□ 0.58
SCARF1-204ENST00000570902 ZNF106Q9H2Y7 1883 aaKnown RBP18.69■□□□□ 0.58
SCARF1-204ENST00000570902 SYCE3A1L190 88 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 PDZK1P1A8MUH7 402 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 CHUKO15111 745 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 KMOO15229 486 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 HLA-DQB2P05538 268 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 SLC19A1P41440 591 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 LEPRP48357 1165 aaKnown RBP18.69■□□□□ 0.58
SCARF1-204ENST00000570902 NIPAL4Q0D2K0 466 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 MMRN1Q13201 1228 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 SEMA5AQ13591 1074 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 CACHD1Q5VU97 1274 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 NCBP2-AS2Q69YL0 99 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 PDPK2PQ6A1A2 396 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 CAPRIN2Q6IMN6 1127 aaKnown RBP18.69■□□□□ 0.58
SCARF1-204ENST00000570902 TMEM135Q86UB9 458 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 FAM71BQ8TC56 605 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 CPT1CQ8TCG5 803 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 KLHL6Q8WZ60 621 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 RNF31Q96EP0 1072 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 PDE7BQ9NP56 450 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 LHX9Q9NQ69 397 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 RAD18Q9NS91 495 aa18.69■□□□□ 0.58
SCARF1-204ENST00000570902 ZNF624Q9P2J8 865 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-204ENST00000570902 CD48P09326 243 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms