RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 S100A12P80511 92 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 AMPD2Q01433 879 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SPIBQ01892 262 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 LCP2Q13094 533 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CALCOCO2Q13137 446 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 AIMP2Q13155 320 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 NOGQ13253 232 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SCGB2A2Q13296 93 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 MSLNQ13421 630 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 TSTA3Q13630 321 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 FGL2Q14314 439 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GAMTQ14353 236 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 HERC3Q15034 1050 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PDCD1Q15116 288 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RPS6KA1Q15418 735 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CCDC153Q494R4 210 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SLC9C1Q4G0N8 1177 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PABPC1LQ4VXU2 614 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 FAM98BQ52LJ0 330 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 GPAT3Q53EU6 434 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 TTMPQ5BVD1 217 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 EFHC1Q5JVL4 640 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 C10orf120Q5SQS8 335 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RARS2Q5T160 578 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 TMTC4Q5T4D3 741 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 FAM69AQ5T7M9 428 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 IER5Q5VY09 327 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 INO80CQ6PI98 192 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 SV2AQ7L0J3 742 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 LRRC8DQ7L1W4 858 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 EFL1Q7Z2Z2 1120 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 ARHGAP22Q7Z5H3 698 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 RTN4RL1Q86UN2 441 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 LRRC6Q86X45 466 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CCNJLQ8IV13 435 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SRRM1Q8IYB3 904 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 LRRC34Q8IZ02 419 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SFRP1Q8N474 314 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 FRMD1Q8N878 549 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ZNF610Q8N9Z0 462 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 ATAD1Q8NBU5 361 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GLB1L3Q8NCI6 653 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 RCBTB1Q8NDN9 531 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 BHLHE23Q8NDY6 225 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CMASQ8NFW8 434 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 GIMAP7Q8NHV1 300 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PPTC7Q8NI37 304 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 NFKBIDQ8NI38 313 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 METTL6Q8TCB7 284 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PAQR8Q8TEZ7 354 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 U2AF1L4Q8WU68 220 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 DYDC1Q8WWB3 177 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RIN2Q8WYP3 895 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 RHBDF1Q96CC6 855 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 MTFMTQ96DP5 389 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 ARHGEF26Q96DR7 871 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 APOPT1Q96IL0 206 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RBM41Q96IZ5 413 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 MRGPRX3Q96LB0 322 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 MYRFLQ96LU7 910 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CCDC42Q96M95 316 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 GDAP1L1Q96MZ0 367 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 FCRL4Q96PJ5 515 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PSMB7Q99436 277 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 OSMRQ99650 979 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 KCNS3Q9BQ31 491 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 LBHD1Q9BQE6 289 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 GORASP1Q9BQQ3 440 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SYT11Q9BT88 431 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMG6-208ENST00000570874 EDEM2Q9BV94 578 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 TPPP3Q9BW30 176 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 LGR4Q9BXB1 951 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 IFIH1Q9BYX4 1025 aaKnown RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 FRMD8P1Q9BZ68 369 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 GPR61Q9BZJ8 451 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RAB33BQ9H082 229 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 FAM49AQ9H0Q0 323 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 WNT8AQ9H1J5 351 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PCED1AQ9H1Q7 454 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CDT1Q9H211 546 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 SLC26A1Q9H2B4 701 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RHBGQ9H310 441 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 NTN4Q9HB63 628 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PCDH9Q9HC56 1237 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 NGBQ9NPG2 151 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 IL26Q9NPH9 171 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 PRDM6Q9NQX0 595 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 KLC4Q9NSK0 619 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 RBAKQ9NYW8 714 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 ERAP1Q9NZ08 941 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 UXTQ9UBK9 157 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 ASH2LQ9UBL3 628 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 TRPS1Q9UHF7 1281 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 FBXL21Q9UKT6 434 aa3.55□□□□□ -1.84
SMG6-208ENST00000570874 CORO1CQ9ULV4 474 aaPredicted RBP3.55□□□□□ -1.84
SMG6-208ENST00000570874 PACSIN2Q9UNF0 486 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms