RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 C16orf72Q14CZ0 275 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 TAF1BQ53T94 588 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC181Q5TID7 509 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 NKAIN2Q5VXU1 208 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC81Q6ZN84 652 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 TMC3Q7Z5M5 1100 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 SFRP1Q8N474 314 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 TRAM1L1Q8N609 369 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 LSM14AQ8ND56 463 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 GPR26Q8NDV2 337 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 OR4D9Q8NGE8 314 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 OR10G6Q8NH81 332 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 EID2BQ96D98 161 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 AHCYL2Q96HN2 611 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC74BQ96LY2 380 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 QKIQ96PU8 341 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 PANX2Q96RD6 677 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 VAT1Q99536 393 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 DPYSL5Q9BPU6 564 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 HERPUD2Q9BSE4 406 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 OR2AG1Q9H205 316 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 ACSL6Q9UKU0 697 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 TFR2Q9UP52 801 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 PCYT1BQ9Y5K3 369 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 TRBV23OR9-2A0A075B6M9 112 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 IGHV5-10-1A0A0J9YXX1 117 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 MACROD2A1Z1Q3 448 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 HACD1B0YJ81 288 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 F5H423 210 aaPredicted RBP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ERVH48-1M5A8F1 160 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 DUX1O43812 170 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 SNX2O60749 519 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 LIPCP11150 499 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF8P17098 575 aaPredicted RBP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 BPIP17213 487 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 CSF2RBP32927 897 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ETV5P41161 510 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF75DP51815 510 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 WNT3AP56704 352 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 HHEXQ03014 270 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ADCY2Q08462 1091 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 TRA2AQ13595 282 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 PPP2R5EQ16537 467 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 TMEM164Q5U3C3 297 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC9B2Q86UD5 537 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF761Q86XN6 746 aaPredicted RBP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 AVL9Q8NBF6 648 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 HTR3CQ8WXA8 447 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 KRT35Q92764 455 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 GLYATL1Q969I3 302 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 SH3KBP1Q96B97 665 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 MRFAP1L1Q96HT8 127 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 CCNL2Q96S94 520 aaPredicted RBP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 OSGEPL1Q9H4B0 414 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 TRIM39Q9HCM9 518 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ARFGAP3Q9NP61 516 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 SARS2Q9NP81 518 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ATXN10Q9UBB4 475 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 SPO11Q9Y5K1 396 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 BAHCC1Q9P281 2608 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 ATMQ13315 3056 aa12.22□□□□□ -0.45
CTDNEP1-205ENST00000570828 KIR2DS5A0A0G2JLQ3 304 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 A0A0G2JNG1 304 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 SOWAHDA6NJG2 315 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 K7ENP7 123 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 KIR2DS3K7RE56 304 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 NDUFA10O95299 355 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 EML2O95834 649 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 APOC2P02655 101 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 THRAP10827 490 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 F3P13726 295 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 CD82P27701 267 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 CSTF2P33240 577 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 CD68P34810 354 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 LIMK2P53671 638 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 NFATC2Q13469 925 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 SQSTM1Q13501 440 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 KIR2DS5Q14953 304 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 INSCQ1MX18 579 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF648Q5T619 568 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 IYDQ6PHW0 289 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 INO80CQ6PI98 192 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 KDELC1Q6UW63 502 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF574Q6ZN55 896 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 BBS12Q6ZW61 710 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 PID1Q7Z2X4 250 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 TMTC1Q8IUR5 882 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF567Q8N184 647 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 AGBL5Q8NDL9 886 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 IPMKQ8NFU5 416 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 SNRNP27Q8WVK2 155 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms