RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 USP10Q14694 798 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HECTD2Q5U5R9 776 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 FAM45BPQ6NSW5 357 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 ZNF549Q6P9A3 640 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 TRIM74Q86UV6 250 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HEATR4Q86WZ0 1026 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 SRRM1Q8IYB3 904 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 FAM45AQ8TCE6 357 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 MZB1Q8WU39 189 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HEXDCQ8WVB3 486 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 SNX19Q92543 992 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 AARSD1Q9BTE6 412 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 C1QTNF1Q9BXJ1 281 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 WDR26Q9H7D7 661 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 GNPTGQ9UJJ9 305 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 NOVA2Q9UNW9 492 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 PCDHB1Q9Y5F3 818 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 KMT2EQ8IZD2 1858 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 IGLV3-16A0A075B6K0 115 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HMGB1P1B2RPK0 211 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 TPP1O14773 563 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 LATO43561 262 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 ESR1P03372 595 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 IGHV4-34P06331 123 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 PKMP14618 531 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HNRNPA2B1P22626 353 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 RPS3P23396 243 aaKnown RBP eCLIP15.26■□□□□ 0.035e-7■■□□□ 12.5
HERPUD1-219ENST00000570273 TEAD1P28347 426 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HOXA6P31267 233 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 NSG1P42857 185 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 FNTBP49356 437 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 SLC12A2P55011 1212 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 B4GALNT1Q00973 533 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 DNAJC3Q13217 504 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 INPP5AQ14642 412 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 CTSL3PQ5NE16 218 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 ZNF648Q5T619 568 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 PTRHD1Q6GMV3 140 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 CMC1Q7Z7K0 106 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 TRABD2AQ86V40 505 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 FBXL6Q8N531 539 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 DTWD2Q8NBA8 298 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 ACVR1CQ8NER5 493 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 CENPTQ96BT3 561 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 TLCD1Q96CP7 247 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 HIC2Q96JB3 615 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 KLF6Q99612 283 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 ZCCHC2Q9C0B9 1178 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 P2RY12Q9H244 342 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 CAB39LQ9H9S4 337 aa15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 MBD1Q9UIS9 605 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 CNOT6Q9ULM6 557 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-219ENST00000570273 TRPM6Q9BX84 2022 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 CCDC163A0A0D9SF12 145 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 A0A1W2PPM1 405 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 PRR33A8MZF0 331 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 C10orf142B7Z368 130 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 H3BQF6 201 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 FPGTO14772 594 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 RHOBTB1O94844 696 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 TDGF1P13385 188 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 NUDT1P36639 197 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 POLD2P49005 469 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 ADARP55265 1226 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 MAGOHP61326 146 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 CDK3Q00526 305 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 POU4F1Q01851 419 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 RPL6Q02878 288 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 CSTF1Q05048 431 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 KHDC1Q4VXA5 237 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 TNFAIP8L3Q5GJ75 292 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 DOK6Q6PKX4 331 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 SLC36A4Q6YBV0 504 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 KDM7AQ6ZMT4 941 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 TIFABQ6ZNK6 161 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 DET1Q7L5Y6 550 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 WDR5BQ86VZ2 330 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 C1orf210Q8IVY1 113 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 NAT14Q8WUY8 206 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 BIRC7Q96CA5 298 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 TSPAN17Q96FV3 270 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 SERAC1Q96JX3 654 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 BIRC8Q96P09 236 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 OLFM1Q99784 485 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 SNX15Q9NRS6 342 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 PHPT1Q9NRX4 125 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 SENP1Q9P0U3 644 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 OR1A2Q9Y585 309 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 COMMD10Q9Y6G5 202 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 OAS3Q9Y6K5 1087 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 PRSS21Q9Y6M0 314 aa15.25■□□□□ 0.03
HERPUD1-219ENST00000570273 ZNF318Q5VUA4 2279 aa15.24■□□□□ 0.03
HERPUD1-219ENST00000570273 FAM86C2PA6NEL3 165 aa15.24■□□□□ 0.03
HERPUD1-219ENST00000570273 MEI4A8MW99 385 aa15.24■□□□□ 0.03
HERPUD1-219ENST00000570273 H3BMM5 538 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms