RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	SLC38A8	A6NNN8	435 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	TK2	O00142	265 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	DFFA	O00273	331 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	AP2A1	O95782	977 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	CLIC3	O95833	236 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	IGLV3-27	P01718	113 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	C2	P06681	752 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	NFKB1	P19838	968 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	ITGB8	P26012	769 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	RFC2	P35250	354 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	GRIA3	P42263	894 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	NAGLU	P54802	743 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	MAPRE2	Q15555	327 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	TRIP4	Q15650	581 aa	Predicted RBP	11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	MS4A13	Q5J8X5	152 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	SAMD4B	Q5PRF9	694 aa	Known RBP	11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	KCTD11	Q693B1	232 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	REP15	Q6BDI9	236 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	EPHX4	Q8IUS5	362 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	OFCC1	Q8IZS5	231 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	OR2T34	Q8NGX1	318 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	OR2T3	Q8NH03	318 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	ZNF689	Q96CS4	500 aa	Predicted RBP	11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	FBXL20	Q96IG2	436 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	TEKT5	Q96M29	485 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	ALPK1	Q96QP1	1244 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	MLPH	Q9BV36	600 aa	Predicted RBP	11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	SLC39A8	Q9C0K1	460 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	CD320	Q9NPF0	282 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	HACD3	Q9P035	362 aa		11.92	□□□□□ -0.5
SPG7-222	ENST00000569820	WASH4P	A8MWX3	477 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	MAFK	O60675	156 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CCDC159	P0C7I6	412 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	MATN1	P21941	496 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CCNC	P24863	283 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	OR1D2	P34982	312 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	KRT6C	P48668	564 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	PRKAA2	P54646	552 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	DEFB103A	P81534	67 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	LRRC26	Q2I0M4	334 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	TBCEL	Q5QJ74	424 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	C10orf120	Q5SQS8	335 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	ZYG11A	Q6WRX3	759 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	MIB1	Q86YT6	1006 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CADM3	Q8N126	398 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	ATPAF2	Q8N5M1	289 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	OR13F1	Q8NGS4	319 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	RDH11	Q8TC12	318 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	ZNF347	Q96SE7	839 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	KLHL25	Q9H0H3	589 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	MUC3B	Q9H195	1237 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	TASP1	Q9H6P5	420 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CCSER2	Q9H7U1	834 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	NANOG	Q9H9S0	305 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	AASDHPPT	Q9NRN7	309 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	SACM1L	Q9NTJ5	587 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	MARCH2	Q9P0N8	246 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CD300A	Q9UGN4	299 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	SARDH	Q9UL12	918 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	VANGL2	Q9ULK5	521 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	AURKC	Q9UQB9	309 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	TCAF1	Q9Y4C2	921 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	MYLK	Q15746	1914 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	GUCY1B2	O75343	617 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CPNE6	O95741	557 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CRYZL1	O95825	349 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	JCHAIN	P01591	159 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	ABCB1	P08183	1280 aa	Predicted RBP	11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	ETV3	P41162	512 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	TIGD2	Q4W5G0	525 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	SPANXN3	Q5MJ09	141 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	KLHDC8B	Q8IXV7	354 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	FAM110B	Q8TC76	370 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	RAB2B	Q8WUD1	216 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	ZNF641	Q96N77	438 aa	Predicted RBP	11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	CLSTN3	Q9BQT9	956 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	C9orf16	Q9BUW7	83 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	NOL6	Q9H6R4	1146 aa	Known RBP	11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	PKD2L2	Q9NZM6	624 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	PSME2	Q9UL46	239 aa		11.91	□□□□□ -0.5
SPG7-222	ENST00000569820	IGLV3-10	A0A075B6K4	115 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	FAM149A	A5PLN7	773 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	TRPC5OS	A6NMA1	111 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	CLDN25	C9JDP6	229 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	TLR5	O60602	858 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	USP12	O75317	370 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	SRP72	O76094	671 aa	Known RBP	11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	SOD2	P04179	222 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	F7	P08709	466 aa	Predicted RBP	11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	ALOX5	P09917	674 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	IDUA	P35475	653 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	ABCG1	P45844	678 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	MLLT10	P55197	1068 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	ATP6V0D1	P61421	351 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	MPP1	Q00013	466 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	ZNF846	Q147U1	533 aa		11.9	□□□□□ -0.5
SPG7-222	ENST00000569820	CRY1	Q16526	586 aa		11.9	□□□□□ -0.5

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