RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 PSAPL1Q6NUJ1 521 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 CENPUQ71F23 418 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 SERPINA9Q86WD7 417 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 GATAD2AQ86YP4 633 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 OR4L1Q8NH43 312 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 LRRC39Q96DD0 335 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 MFSD3Q96ES6 412 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 DCUN1D1Q96GG9 259 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 SIGLEC10Q96LC7 697 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 PWWP2AQ96N64 755 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 OR2M4Q96R27 311 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 TTC1Q99614 292 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 COPS8Q99627 209 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 NAT9Q9BTE0 207 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 TCEAL2Q9H3H9 227 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-217ENST00000569263 RMI1Q9H9A7 625 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 EPB41L5Q9HCM4 733 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 FAM114A2Q9NRY5 505 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 CATSPERZQ9NTU4 200 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 CDV3Q9UKY7 258 aaKnown RBP12.92□□□□□ -0.34
CNOT1-217ENST00000569263 TMPRSS11EQ9UL52 423 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 DOLKQ9UPQ8 538 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 CHMP2BQ9UQN3 213 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 GPSM3Q9Y4H4 160 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 PCDHGB2Q9Y5G2 931 aa12.92□□□□□ -0.34
CNOT1-217ENST00000569263 ZFC3H1O60293 1989 aaKnown RBP12.92□□□□□ -0.34
CNOT1-217ENST00000569263 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 WDR87Q6ZQQ6 2873 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ZNF292O60281 2723 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 LAMA1P25391 3075 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TRBV5-4A0A0C4DH59 114 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 NEMP2A6NFY4 417 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 AGAP14A8MT82 685 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 FFAR2O15552 330 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 FLRT2O43155 660 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 NUAK1O60285 661 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 DNAJC6O75061 913 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 USP1O94782 785 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 CDK14O94921 469 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 VAPBO95292 243 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TTC4O95801 387 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 PRSS56P0CW18 603 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ALPPL2P10696 532 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 DGKAP23743 735 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ACRV1P26436 265 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 FOXN2P32314 431 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 PPARGP37231 505 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 GRK6P43250 576 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 CDKN1CP49918 316 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 DRG2P55039 364 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TMEM115Q12893 351 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ILF3Q12906 894 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■□□□□ 9.4
CNOT1-217ENST00000569263 PDIA2Q13087 525 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 C1orf61Q13536 156 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ANKRD20A4Q4UJ75 823 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 MSS51Q4VC12 460 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 KHDC1Q4VXA5 237 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 HP1BP3Q5SSJ5 553 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TEX35Q5T0J7 233 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 CRTC3Q6UUV7 619 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 MICALCLQ6ZW33 695 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ADGRG6Q86SQ4 1221 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TRAPPC5Q8IUR0 188 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 AGGF1Q8N302 714 aaeCLIP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 FSTL5Q8N475 847 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 SAP25Q8TEE9 199 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 HEXDCQ8WVB3 486 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ART4Q93070 314 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 CFAP36Q96G28 342 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 EBNA1BP2Q99848 306 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 UCKL1Q9NWZ5 548 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 ZDHHC3Q9NYG2 299 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 DMGDHQ9UI17 866 aaKnown RBP12.91□□□□□ -0.34
CNOT1-217ENST00000569263 KNL1Q8NG31 2342 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 BPTFQ12830 3046 aa12.91□□□□□ -0.34
CNOT1-217ENST00000569263 TP73O15350 636 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 EIF3HO15372 352 aaKnown RBP eCLIP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CD3EAPO15446 510 aaKnown RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 GRID2O43424 1007 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 ANXA6P08133 673 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 RHOXF2BP0C7M4 288 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CA5AP35218 305 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 ELK3P41970 407 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 THOC5Q13769 683 aaKnown RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CRYMQ14894 314 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 TRADDQ15628 312 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 SMAD1Q15797 465 aaKnown RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 INSCQ1MX18 579 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 PYCR3Q53H96 274 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 LYPLAL1Q5VWZ2 237 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 DET1Q7L5Y6 550 aa12.9□□□□□ -0.34
CNOT1-217ENST00000569263 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-217ENST00000569263 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms