RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PMEPA1Q969W9 287 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 TMEM159Q96B96 161 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 CCDC74BQ96LY2 380 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 VPS35Q96QK1 796 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 BAG1Q99933 345 aaPredicted RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 FAM118BQ9BPY3 351 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 DESI2Q9BSY9 194 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 DPH1Q9BZG8 443 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 GPR63Q9BZJ6 419 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 STRADBQ9C0K7 418 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 OR2AG1Q9H205 316 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 TRABDQ9H4I3 376 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 CPNE5Q9HCH3 593 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 TRIM39Q9HCM9 518 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 SARS2Q9NP81 518 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 IL26Q9NPH9 171 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 RAD18Q9NS91 495 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 FOXJ2Q9P0K8 574 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 IL17CQ9P0M4 197 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 PDP2Q9P2J9 529 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 PISDQ9UG56 409 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 SLC23A2Q9UGH3 650 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 RSPH14Q9UHP6 348 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDH3-209ENST00000569080 CAPN6Q9Y6Q1 641 aa7.73□□□□□ -1.17
CDH3-209ENST00000569080 SPENQ96T58 3664 aaKnown RBP7.73□□□□□ -1.17
CDH3-209ENST00000569080 PRAMEF33A0A0G2JMD5 474 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 HGSO14964 777 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 NVLO15381 856 aaKnown RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 KLK10O43240 276 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PRAMEF10O60809 474 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 C1QL1O75973 258 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SLC25A14O95258 325 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 CCL4P13236 92 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 F3P13726 295 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 BRAFP15056 766 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PSMB4P28070 264 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 ALDH4A1P30038 563 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SLC5A2P31639 672 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SPAM1P38567 509 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 LIMK2P53671 638 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 RWDD2BP57060 319 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 TMPRSS3P57727 454 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 CXADRP78310 365 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 GPLD1P80108 840 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SRSF6Q13247 344 aaKnown RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 OLIG2Q13516 323 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PEX6Q13608 980 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PHF19Q5T6S3 580 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 NKAIN2Q5VXU1 208 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 XKR5Q6UX68 686 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 RANBP10Q6VN20 620 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PID1Q7Z2X4 250 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PIM3Q86V86 326 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 CDKL3Q8IVW4 592 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 SLC25A41Q8N5S1 370 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 BMPERQ8N8U9 685 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 RCBTB1Q8NDN9 531 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 IPMKQ8NFU5 416 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 OR4D9Q8NGE8 314 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SPATA13Q96N96 652 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 UBL7Q96S82 380 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 SRPK1Q96SB4 655 aaKnown RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 TIMM29Q9BSF4 260 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 BPIFA1Q9NP55 256 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SMOXQ9NWM0 555 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 KCNK4Q9NYG8 393 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 HACD3Q9P035 362 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 SCHIP1Q9P0W5 487 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 ZNHIT2Q9UHR6 403 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 TRHDEQ9UKU6 1024 aa7.72□□□□□ -1.17
CDH3-209ENST00000569080 PACSIN2Q9UNF0 486 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 MN1Q10571 1320 aaPredicted RBP7.72□□□□□ -1.17
CDH3-209ENST00000569080 KIR2DS5A0A0G2JLQ3 304 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 A0A0G2JNG1 304 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 TEX51A0A1B0GUA7 166 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 MACROD2A1Z1Q3 448 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 LILRA5A6NI73 299 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 H7C0C1 242 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 K7ENP7 123 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 KIR2DS3K7RE56 304 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 EFSO43281 561 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 BUD23O43709 281 aaKnown RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 VEGFDO43915 354 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 IPO7O95373 1038 aaKnown RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 AGTP01019 485 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 JMJD7P0C870 316 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 RBP3P10745 1247 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 FGF3P11487 239 aaPredicted RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 ATP5OP48047 213 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 ZNF140P52738 457 aaPredicted RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 CTSCP53634 463 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 EPHA4P54764 986 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 UCNP55089 124 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 EIF3EP60228 445 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms