RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SMIM14Q96QK8 99 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 WDR24Q96S15 920 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 ING2Q9H160 280 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 PDE7BQ9NP56 450 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 SLAMF7Q9NQ25 335 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 PARVAQ9NVD7 372 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 EPHA6Q9UF33 1036 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 ERRFI1Q9UJM3 462 aaPredicted RBP12.29□□□□□ -0.44
SNX29-207ENST00000568949 RGSL1A5PLK6 1076 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 FADS2P1A8MWK0 482 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 GPR89AB7ZAQ6 455 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 KIF1CO43896 1103 aaKnown RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 TIAF1O95411 115 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 GPR89BP0CG08 455 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 ATP1A3P13637 1013 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 LPOP22079 712 aaPredicted RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 ELAVL4P26378 380 aaKnown RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 SLC19A1P41440 591 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 CAPZBP47756 277 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 EPHB1P54762 984 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 LAMB3Q13751 1172 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 PRR30Q53SZ7 412 aaPredicted RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 HENMT1Q5T8I9 393 aaKnown RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 PPP1R2P3Q6NXS1 205 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 TMCO3Q6UWJ1 677 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 TEX26Q8N6G2 289 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 TCTN2Q96GX1 697 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 LYSMD1Q96S90 227 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 RAB33BQ9H082 229 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 FAM83DQ9H4H8 585 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 NT5MQ9NPB1 228 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 POT1Q9NUX5 634 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 SCHIP1Q9P0W5 487 aaPredicted RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 SEMA5BQ9P283 1151 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 ZNF624Q9P2J8 865 aaPredicted RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 RARRES3Q9UL19 164 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 SIK3Q9Y2K2 1263 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 CELSR2Q9HCU4 2923 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 LRBAP50851 2863 aa12.28□□□□□ -0.44
SNX29-207ENST00000568949 PRRC2CQ9Y520 2896 aaKnown RBP12.28□□□□□ -0.44
SNX29-207ENST00000568949 POLEQ07864 2286 aa12.27□□□□□ -0.44
SNX29-207ENST00000568949 ARGFXA6NJG6 315 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 CLDN7O95471 211 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 TPM2P07951 284 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 ZNF8P17098 575 aaPredicted RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 AMPD1P23109 780 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 CES1P23141 567 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 ARL4AP40617 200 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 SPINT3P49223 89 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 RPL26P61254 145 aaKnown RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 RPS18P62269 152 aaKnown RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 PDE1BQ01064 536 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 DPYSL2Q16555 572 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 C1QL3Q5VWW1 255 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 PWWP2BQ6NUJ5 590 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 ABRAXAS1Q6UWZ7 409 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 RBM12BQ8IXT5 1001 aaKnown RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 UBXN4Q92575 508 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 RSC1A1Q92681 617 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 PNPLA2Q96AD5 504 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 SLC41A2Q96JW4 573 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 RUFY1Q96T51 708 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 POLR1EQ9GZS1 481 aaKnown RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 OSGEPL1Q9H4B0 414 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 ATXN10Q9UBB4 475 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 RPL26L1Q9UNX3 145 aaKnown RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 FARSAQ9Y285 508 aaKnown RBP12.27□□□□□ -0.45
SNX29-207ENST00000568949 SLC5A6Q9Y289 635 aa12.27□□□□□ -0.45
SNX29-207ENST00000568949 SSU72P8A0A1W2PR75 194 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 TMEM191CA6NGB0 347 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 MTA2O94776 668 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 CA4P22748 312 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 SERPINB6P35237 376 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 RIPPLY3P57055 190 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 UBE2HP62256 183 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 ACY1Q03154 408 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 TUBB3Q13509 450 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 IL10RAQ13651 578 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 SLC6A19Q695T7 634 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 ALG1LQ6GMV1 187 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 FAM92BQ6ZTR7 304 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 SLC34A3Q8N130 599 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 RBMXL3Q8N7X1 1067 aaKnown RBP12.26□□□□□ -0.45
SNX29-207ENST00000568949 SIDT2Q8NBJ9 832 aaKnown RBP12.26□□□□□ -0.45
SNX29-207ENST00000568949 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 C5orf34Q96MH7 638 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms