RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RD3Q7Z3Z2 195 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 HID1Q8IV36 788 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 MINDY1Q8N5J2 469 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 OR2I1PQ8NGU4 316 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 PYROXD1Q8WU10 500 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 CFAP36Q96G28 342 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 PDXPQ96GD0 296 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 COPS8Q99627 209 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 OR2AG1Q9H205 316 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 IL21RQ9HBE5 538 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 CYP4F12Q9HCS2 524 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 MRPL40Q9NQ50 206 aaKnown RBP16.57■□□□□ 0.24
COMMD4-224ENST00000568877 RXFP3Q9NSD7 469 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 CATSPERZQ9NTU4 200 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 ZDHHC3Q9NYG2 299 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 MOSPD1Q9UJG1 213 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 DGKBQ9Y6T7 804 aa16.57■□□□□ 0.24
COMMD4-224ENST00000568877 A0A1B0GTQ1 180 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 GPR89AB7ZAQ6 455 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 GOLGA8KD6RF30 607 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 GOLGA8TH3BQL2 631 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 CDK14O94921 469 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 GPR89BP0CG08 455 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 ZNF8P17098 575 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 JUNDP17535 347 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 MSH3P20585 1137 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 AKT1P31749 480 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 HK3P52790 923 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 SHBQ15464 509 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 SMAD1Q15797 465 aaKnown RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 DBN1Q16643 649 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 AASDHQ4L235 1098 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 AARS2Q5JTZ9 985 aaKnown RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 STEAP4Q687X5 459 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 NEPROQ6NW34 567 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 CERS6Q6ZMG9 384 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 CEP128Q6ZU80 1094 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 MARK2Q7KZI7 788 aaKnown RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 PHACTR4Q8IZ21 702 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 HEXDCQ8WVB3 486 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 SCARF2Q96GP6 870 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 TTC25Q96NG3 672 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 FMO2Q99518 471 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 TTC1Q99614 292 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 EDEM2Q9BV94 578 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 SLC13A1Q9BZW2 595 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 ZCCHC2Q9C0B9 1178 aaKnown RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 CAAP1Q9H8G2 361 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 RMI1Q9H9A7 625 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 CARS2Q9HA77 564 aaKnown RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 PLAC1Q9HBJ0 212 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 C20orf96Q9NUD7 363 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 IL1RAPL1Q9NZN1 696 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 MARCH4Q9P2E8 410 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-224ENST00000568877 NFU1Q9UMS0 254 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 SUFUQ9UMX1 484 aa16.56■□□□□ 0.24
COMMD4-224ENST00000568877 IGLV3-16A0A075B6K0 115 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 H3BM21 787 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 CDX4O14627 284 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 YKT6O15498 198 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 NUAK1O60285 661 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 DNAJC6O75061 913 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 RALBP11234 206 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 PPARGP37231 505 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 MAGEA4P43358 317 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 GNPDA1P46926 289 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 CCT8P50990 548 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 HNRNPKP61978 463 aaKnown RBP eCLIP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 THOC5Q13769 683 aaKnown RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 GTF2H3Q13889 308 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 SEMA3AQ14563 771 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 MRNIPQ6NTE8 343 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 PALM2Q8IXS6 379 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 RBFAQ8N0V3 343 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 OTUD6BQ8N6M0 293 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 PNPLA1Q8N8W4 532 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 GPR150Q8NGU9 434 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 UBXN4Q92575 508 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 DCUN1D1Q96GG9 259 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 TCEAL2Q9H3H9 227 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 ANKZF1Q9H8Y5 726 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 APOBEC3BQ9UH17 382 aaKnown RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.55■□□□□ 0.24
COMMD4-224ENST00000568877 LAMA1P25391 3075 aa16.55■□□□□ 0.24
COMMD4-224ENST00000568877 CFAP99D6REC4 459 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 CHUKO15111 745 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 SCAMP1O15126 338 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 GRID2O43424 1007 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 PIAS2O75928 621 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 TTPAP49638 278 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 B4GALNT1Q00973 533 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 IL9RQ01113 521 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 BNIP3Q12983 259 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 FRG1Q14331 258 aaKnown RBP16.54■□□□□ 0.24
COMMD4-224ENST00000568877 ITIH4Q14624 930 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 PYCR3Q53H96 274 aa16.54■□□□□ 0.24
COMMD4-224ENST00000568877 SDCCAG8Q86SQ7 713 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-224ENST00000568877 LDB1Q86U70 411 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms