RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 RMI1Q9H9A7 625 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 SLC23A2Q9UGH3 650 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 AMACRQ9UHK6 382 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 SHOC2Q9UQ13 582 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 DNAJC16Q9Y2G8 782 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 LILRA5A6NI73 299 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 PDZK1P1A8MUH7 402 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 ANKRD66B4E2M5 251 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 PROSCO94903 275 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 TCN2P20062 427 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 LEPRP48357 1165 aaKnown RBP15.31■□□□□ 0.04
NME3-211ENST00000568561 SH3BP2P78314 561 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 FOXK1P85037 733 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 IQCB1Q15051 598 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 INSCQ1MX18 579 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 ZFYVE27Q5T4F4 411 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 ALKBH5Q6P6C2 394 aaKnown RBP15.31■□□□□ 0.04
NME3-211ENST00000568561 CNTD1Q8N815 330 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 GPR26Q8NDV2 337 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 FATE1Q969F0 183 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 FAF2Q96CS3 445 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 HDAC11Q96DB2 347 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.31■□□□□ 0.04
NME3-211ENST00000568561 ULBP3Q9BZM4 244 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 HAUS2Q9NVX0 235 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 CTTNBP2NLQ9P2B4 639 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 BZW2Q9Y6E2 419 aaKnown RBP15.31■□□□□ 0.04
NME3-211ENST00000568561 SLC30A1Q9Y6M5 507 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 RPS6KL1Q9Y6S9 549 aa15.31■□□□□ 0.04
NME3-211ENST00000568561 SPTBN1Q01082 2364 aaKnown RBP15.31■□□□□ 0.04
NME3-211ENST00000568561 KIF1CO43896 1103 aaKnown RBP15.3■□□□□ 0.04
NME3-211ENST00000568561 MTA2O94776 668 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 SLC25A14O95258 325 aaPredicted RBP15.3■□□□□ 0.04
NME3-211ENST00000568561 MX2P20592 715 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 DLSTP36957 453 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 PBX1P40424 430 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 PDK2Q15119 407 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 PCSK7Q16549 785 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 CAVIN1Q6NZI2 390 aaKnown RBP15.3■□□□□ 0.04
NME3-211ENST00000568561 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 B4GALNT4Q76KP1 1039 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 ADGRG6Q86SQ4 1221 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 PLXDC1Q8IUK5 500 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 TRIM48Q8IWZ4 208 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 RAVER1Q8IY67 606 aaKnown RBP15.3■□□□□ 0.04
NME3-211ENST00000568561 ESX1Q8N693 406 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 GALNT6Q8NCL4 622 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 APOBEC4Q8WW27 367 aaKnown RBP15.3■□□□□ 0.04
NME3-211ENST00000568561 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 RSC1A1Q92681 617 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 C9orf72Q96LT7 481 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 EFHD1Q9BUP0 239 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 PACSIN1Q9BY11 444 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 ZFYVE1Q9HBF4 777 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 ZNF624Q9P2J8 865 aaPredicted RBP15.3■□□□□ 0.04
NME3-211ENST00000568561 ANKMY1Q9P2S6 941 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 ANAPC2Q9UJX6 822 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 PLAAQ9Y263 795 aa15.3■□□□□ 0.04
NME3-211ENST00000568561 RP1L1Q8IWN7 2480 aaPredicted RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 TNRC6AQ8NDV7 1962 aaKnown RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 A0A1W2PQJ5 194 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 OR5K4A6NMS3 321 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 OR52A4PA6NMU1 304 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 K7EM74 188 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 RASSF9O75901 435 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 UBXN7O94888 489 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 VIPP01282 170 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 C9P02748 559 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 FURINP09958 794 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 ANKRD34CP0C6C1 535 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 RPL10P27635 214 aaKnown RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 SLC19A1P41440 591 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 NOP2P46087 812 aaKnown RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 DRG2P55039 364 aaKnown RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 IFI35P80217 286 aaPredicted RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 FANCCQ00597 558 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 KHDC1Q4VXA5 237 aaKnown RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 LACTB2Q53H82 288 aaPredicted RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 TMEM135Q86UB9 458 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 PLD5Q8N7P1 536 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 SYN2Q92777 582 aaPredicted RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 GLYATL1Q969I3 302 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 ZNF830Q96NB3 372 aaPredicted RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 OR6C1Q96RD1 312 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 TRIB3Q96RU7 358 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 ADGRE3Q9BY15 652 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 TRIT1Q9H3H1 467 aaKnown RBP15.29■□□□□ 0.04
NME3-211ENST00000568561 EPB41L1Q9H4G0 881 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 TRIM10Q9UDY6 481 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 CROTQ9UKG9 612 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 NENFQ9UMX5 172 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 TP53TG5Q9Y2B4 290 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 ZNF711Q9Y462 761 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 HEY1Q9Y5J3 304 aa15.29■□□□□ 0.04
NME3-211ENST00000568561 RGSL1A5PLK6 1076 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 PRR19A6NJB7 356 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 BRAFP15056 766 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 ZNF7P17097 686 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms