RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	TCF4	P15884	667 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	TYRP1	P17643	537 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	CES1	P23141	567 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	SERPINB6	P35237	376 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	SLC19A1	P41440	591 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	LEPR	P48357	1165 aa	Known RBP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	RPL26	P61254	145 aa	Known RBP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	DSC2	Q02487	901 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	ITK	Q08881	620 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	SMTNL2	Q2TAL5	461 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	PRSS42	Q7Z5A4	293 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	PHYKPL	Q8IUZ5	450 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	ARRDC2	Q8TBH0	407 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	CT55	Q8WUE5	264 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	KLHL6	Q8WZ60	621 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	MAML1	Q92585	1016 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	TGM7	Q96PF1	710 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	TDRD1	Q9BXT4	1180 aa	Known RBP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	PCDH18	Q9HCL0	1135 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	MLXIPL	Q9NP71	852 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	ATXN10	Q9UBB4	475 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	LNPEP	Q9UIQ6	1025 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	MYO6	Q9UM54	1294 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	RPL26L1	Q9UNX3	145 aa	Known RBP	11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	MAP4K5	Q9Y4K4	846 aa		11.22	□□□□□ -0.61
TCF4-238	ENST00000568169	TEP1	Q99973	2627 aa	Known RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	C1orf232	A0A0U1RR37	186 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	RGSL1	A5PLK6	1076 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	C21orf140	B9A014	251 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	KIF1C	O43896	1103 aa	Known RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	SORBS2	O94875	1100 aa	Known RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	VIP	P01282	170 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	MT-ND3	P03897	115 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	ZNF8	P17098	575 aa	Predicted RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	AMD1	P17707	334 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	LCE2D	Q5TA82	110 aa	Predicted RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	TXNRD3NB	Q6F5E7	133 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	APTX	Q7Z2E3	356 aa	Known RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	ANKRD20A12P	Q8NF67	263 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	TEKT4	Q8WW24	435 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	SEC14L1	Q92503	715 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	HSPH1	Q92598	858 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	ELMO2	Q96JJ3	720 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	FCRL4	Q96PJ5	515 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	BRD8	Q9H0E9	1235 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	OSGEPL1	Q9H4B0	414 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	TRIM39	Q9HCM9	518 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	LHX9	Q9NQ69	397 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	KLC4	Q9NSK0	619 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	PKD2L2	Q9NZM6	624 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	EPHA6	Q9UF33	1036 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	SLC23A2	Q9UGH3	650 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	AMACR	Q9UHK6	382 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	SCIN	Q9Y6U3	715 aa		11.21	□□□□□ -0.61
TCF4-238	ENST00000568169	CNTRL	Q7Z7A1	2325 aa		11.21	□□□□□ -0.62
TCF4-238	ENST00000568169	POLE	Q07864	2286 aa		11.21	□□□□□ -0.62
TCF4-238	ENST00000568169	ZGRF1	Q86YA3	2104 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	CENPE	Q02224	2701 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ENO4	A6NNW6	628 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	GPR89A	B7ZAQ6	455 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	CHUK	O15111	745 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	MATN3	O15232	486 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	RASSF9	O75901	435 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	TIAF1	O95411	115 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	GPR89B	P0CG08	455 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	NELFE	P18615	380 aa	Known RBP	11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	CA4	P22748	312 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	IL4R	P24394	825 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	CASP14	P31944	242 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	PGD	P52209	483 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	NIPAL4	Q0D2K0	466 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	GALNT2	Q10471	571 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	QPCT	Q16769	361 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	UGT8	Q16880	541 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	NADK2	Q4G0N4	442 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ANKRD20A8P	Q5CZ79	823 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ZNF648	Q5T619	568 aa	Predicted RBP	11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	CACHD1	Q5VU97	1274 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	PAPD7	Q5XG87	772 aa	Known RBP	11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ABRAXAS1	Q6UWZ7	409 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	PPP1R3B	Q86XI6	285 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	TRIM48	Q8IWZ4	208 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	LPCAT1	Q8NF37	534 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	CCHCR1	Q8TD31	782 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	THAP4	Q8WY91	577 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	RSC1A1	Q92681	617 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	FATE1	Q969F0	183 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ZNF653	Q96CK0	615 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	TSGA13	Q96PP4	275 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	SLC25A23	Q9BV35	468 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	GPR87	Q9BY21	358 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	RAB33B	Q9H082	229 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	OR2AG1	Q9H205	316 aa		11.2	□□□□□ -0.62
TCF4-238	ENST00000568169	ACTL8	Q9H568	366 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms