RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 KATNA1O75449 491 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 GCATO75600 419 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 NCR1O76036 304 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ARIH2O95376 493 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 LGALS2P05162 132 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 RPLP2P05387 115 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 MYL3P08590 195 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 SNRPAP09012 282 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ZSCAN5DPP0CG00 497 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 DHRS4L1P0CG22 281 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 PDGFRAP16234 1089 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CYP3A5P20815 502 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CALB2P22676 271 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 PRKCHP24723 683 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 IL1R2P27930 398 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 GCAP28676 217 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 BMPR1AP36894 532 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 FDFT1P37268 417 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 RPL34P49207 117 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CCNG1P51959 295 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CHN2P52757 468 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 SLC16A1P53985 500 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 BCAT1P54687 386 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 RAP2BP61225 183 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 BASP1P80723 227 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ARHGAP8P85298 464 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 SLC18A2Q05940 514 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ARHGAP1Q07960 439 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 DMWDQ09019 674 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 MTM1Q13496 603 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 KCNJ11Q14654 390 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 KRT72Q14CN4 511 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 LLGL1Q15334 1064 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ZRSR2Q15696 482 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ZKSCAN8Q15776 578 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 DPYSL2Q16555 572 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 BEAN1Q3B7T3 259 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 PDCD4Q53EL6 469 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 WASHC2DQ5SRD0 308 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 STXBP5Q5T5C0 1151 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 AGAP9Q5VTM2 703 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ATG16L1Q676U5 607 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 JADE1Q6IE81 842 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TAPT1Q6NXT6 567 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 LVRNQ6Q4G3 990 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 SCARA5Q6ZMJ2 495 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 Q6ZPA2 131 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 SLC26A9Q7LBE3 791 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 STRADAQ7RTN6 431 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 MRGPRGQ86SM5 289 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TBC1D1Q86TI0 1168 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 LRRC6Q86X45 466 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CEP57Q86XR8 500 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ECHDC2Q86YB7 292 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 APLFQ8IW19 511 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 VPS52Q8N1B4 723 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 BANPQ8N9N5 519 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 FBXO36Q8NEA4 188 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 JOSD2Q8TAC2 188 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 GDAP1Q8TB36 358 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ACMSDQ8TDX5 336 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ATP2A3Q93084 1043 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TOP1MTQ969P6 601 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ERP27Q96DN0 273 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CHFRQ96EP1 664 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TNIP3Q96KP6 325 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 C7orf26Q96N11 449 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CDCA3Q99618 268 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 PAIP2Q9BPZ3 127 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 RTP3Q9BQQ7 232 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 KATNAL1Q9BW62 490 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 REXO4Q9GZR2 422 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 ELOVL4Q9GZR5 314 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 MMADHCQ9H3L0 296 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 STN1Q9H668 368 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 EBF2Q9HAK2 575 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 PCDH12Q9NPG4 1184 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 EIF2B3Q9NR50 452 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 DNAJC17Q9NVM6 304 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 GEMIN8Q9NWZ8 242 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 DPP3Q9NY33 737 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TUBD1Q9UJT1 453 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TSPAN16Q9UKR8 245 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 UBQLN1Q9UMX0 589 aaKnown RBP5.35□□□□□ -1.55
CAPN3-217ENST00000567817 AGAP1Q9UPQ3 857 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 TEX264Q9Y6I9 313 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 DNAH14Q0VDD8 3507 aa5.35□□□□□ -1.55
CAPN3-217ENST00000567817 CFAP47Q6ZTR5 3102 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 NRCAMQ92823 1304 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 CENPVL1A0A0U1RR11 272 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 TCRBV9S1A1TA0A576 114 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 MARCH11A6NNE9 402 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 H7C0C1 242 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 COPEO14579 308 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 BIRC5O15392 142 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 NCAM2O15394 837 aa5.34□□□□□ -1.55
CAPN3-217ENST00000567817 B4GALT5O43286 388 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms