RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SNTG1Q9NSN8 517 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 EXD2Q9NVH0 621 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RAB23Q9ULC3 237 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CLEC4AQ9UMR7 237 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR6C70A6NIJ9 312 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CXCR6O00574 342 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 B4GALT4O60513 344 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 OAS1P00973 400 aaKnown RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 YWHAQP27348 245 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 CAPZA2P47755 286 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RETSATQ6NUM9 610 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM180AQ6UWF9 173 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMBIM1Q969X1 311 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 UTP4Q969X6 686 aaKnown RBP12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 APOLD1Q96LR9 279 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 TBATAQ96M53 351 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 NLNQ9BYT8 704 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 C12orf4Q9NQ89 552 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 ANGPT4Q9Y264 503 aa12.32□□□□□ -0.44
CSPG4P13-202ENST00000567704 RBM47A0AV96 593 aaKnown RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM92AA1XBS5 289 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TNFRSF11BO00300 401 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 AURKAO14965 403 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 NDUFB5O43674 189 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 RNASEH2AO75792 299 aaKnown RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC6A2P23975 617 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 CD83Q01151 205 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ARMC12Q5T9G4 340 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SYCE2Q6PIF2 218 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 PTF1AQ7RTS3 328 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM83AQ86UY5 434 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF420Q8TAQ5 688 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 STON2Q8WXE9 905 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC38A2Q96QD8 506 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZBTB26Q9HCK0 441 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ILVBLA1L0T0 632 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR4F21O95013 312 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRLP01236 227 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 PTPN3P26045 913 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SDC2P34741 201 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 RAB39AQ14964 217 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 PCLAFQ15004 111 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 USP43Q70EL4 1123 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 CHSY3Q70JA7 882 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRMT11Q7Z4G4 463 aaKnown RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 GALNT12Q8IXK2 581 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 COPS5Q92905 334 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 LRRC58Q96CX6 371 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 FCRL2Q96LA5 508 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 KIFC1Q9BW19 673 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 LRTM1Q9HBL6 345 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 POLE4Q9NR33 117 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SMPD4Q9NXE4 827 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRPM5Q9NZQ8 1165 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 EBF1Q9UH73 591 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 FABP12A6NFH5 140 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 PGRP06401 933 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 C8BP07358 591 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SKIV2LQ15477 1246 aaKnown RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TPRG1LQ5T0D9 272 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 MFSD14CQ5VZR4 134 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 LENG9Q96B70 501 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRNT1Q96Q11 434 aaKnown RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 BBS4Q96RK4 519 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TTYH1Q9H313 450 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 UCKL1Q9NWZ5 548 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 MARCH2Q9P0N8 246 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 PFDN2Q9UHV9 154 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TCAF1Q9Y4C2 921 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 GPR182O15218 404 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 OGDHQ02218 1023 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC9A5Q14940 896 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 TIGD6Q17RP2 521 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 DEF8Q6ZN54 512 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 NIPA2Q8N8Q9 360 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ANKRD49Q8WVL7 239 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 HERC2P3Q9BVR0 1158 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 ITM2CQ9NQX7 267 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAIMQ9NVQ4 179 aa12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM172BPA6NC97 362 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 DLX3O60479 287 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 VNN1O95497 513 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 CKMP06732 381 aa12.3□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRG2P13727 222 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms