RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 BMFQ96LC9 184 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 CYTH2Q99418 400 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 COPS8Q99627 209 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 ACBD3Q9H3P7 528 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 ACSS3Q9H6R3 686 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 INTS10Q9NVR2 710 aaKnown RBP14.66□□□□□ -0.06
SPG7-213ENST00000566221 ZDHHC3Q9NYG2 299 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 TMPRSS11EQ9UL52 423 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 RAB23Q9ULC3 237 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 CNOT6Q9ULM6 557 aaKnown RBP14.66□□□□□ -0.06
SPG7-213ENST00000566221 VPS9D1Q9Y2B5 631 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 OR1A2Q9Y585 309 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 R4GN57 208 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 ADAMTS9Q9P2N4 1935 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 VPS13AQ96RL7 3174 aa14.66□□□□□ -0.06
SPG7-213ENST00000566221 ATXN2Q99700 1313 aaKnown RBP14.66□□□□□ -0.06
SPG7-213ENST00000566221 IGLV3-16A0A075B6K0 115 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 PRR5-ARHGAP8B1AHC4 643 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 CFAP99D6REC4 459 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 BCAT2O15382 392 aaPredicted RBP14.65□□□□□ -0.06
SPG7-213ENST00000566221 MAGEC1O60732 1142 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 RALBP11234 206 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 KELP23276 732 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 HTR1BP28222 390 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 AKT1P31749 480 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 HSD17B3P37058 310 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 AFF3P51826 1226 aaKnown RBP14.65□□□□□ -0.06
SPG7-213ENST00000566221 THOP1P52888 689 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 SEMA3AQ14563 771 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 CASP8Q14790 479 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 NFATC4Q14934 902 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 KLHL38Q2WGJ6 581 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 KBTBD12Q3ZCT8 623 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 TEDDM1Q5T9Z0 273 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 PEAR1Q5VY43 1037 aaPredicted RBP14.65□□□□□ -0.06
SPG7-213ENST00000566221 PACS1Q6VY07 963 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 KDM7AQ6ZMT4 941 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 MARK2Q7KZI7 788 aaKnown RBP14.65□□□□□ -0.06
SPG7-213ENST00000566221 RABEPKQ7Z6M1 372 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 GALNT7Q86SF2 657 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 TRIM74Q86UV6 250 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 SLC26A11Q86WA9 606 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 DCP2Q8IU60 420 aaKnown RBP14.65□□□□□ -0.06
SPG7-213ENST00000566221 SYT12Q8IV01 421 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 RBFAQ8N0V3 343 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 MFSD2AQ8NA29 543 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 C2CD4AQ8NCU7 369 aaPredicted RBP14.65□□□□□ -0.06
SPG7-213ENST00000566221 OR13H1Q8NG92 308 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 DCUN1D1Q96GG9 259 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 LOXL4Q96JB6 756 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 EPB41L4BQ9H329 900 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 GPR27Q9NS67 375 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 VPS18Q9P253 973 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 PILRBQ9UKJ0 227 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 FBXO5Q9UKT4 447 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 SLCO1B1Q9Y6L6 691 aa14.65□□□□□ -0.06
SPG7-213ENST00000566221 A0A1B0GTW7 788 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 A0A1W2PR77 199 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 GPR89AB7ZAQ6 455 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 MAP2K7O14733 419 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 VEGFDO43915 354 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 NDUFS3O75489 264 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 C1QAP02745 245 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 GPR89BP0CG08 455 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 MSH3P20585 1137 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 CA5AP35218 305 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 ILF2Q12905 390 aaKnown RBP14.64□□□□□ -0.07
SPG7-213ENST00000566221 CTBP1Q13363 440 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 PTK2BQ14289 1009 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 SLC29A2Q14542 456 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 TEAD4Q15561 434 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 UAP1Q16222 522 aaPredicted RBP14.64□□□□□ -0.07
SPG7-213ENST00000566221 MACC1Q6ZN28 852 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 Q6ZSR6 202 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 MTERF4Q7Z6M4 381 aaKnown RBP14.64□□□□□ -0.07
SPG7-213ENST00000566221 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 DENND6AQ8IWF6 608 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 CTAGE3PQ8IX95 158 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 SKA1Q96BD8 255 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 KLHDC7BQ96G42 594 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 WDR92Q96MX6 357 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 LGR4Q9BXB1 951 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 TRIM39Q9HCM9 518 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 SMYD2Q9NRG4 433 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 TXNDC16Q9P2K2 825 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 SLC17A6Q9P2U8 582 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 RABGEF1Q9UJ41 708 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 SMG5Q9UPR3 1016 aaKnown RBP14.64□□□□□ -0.07
SPG7-213ENST00000566221 OAS3Q9Y6K5 1087 aaKnown RBP14.64□□□□□ -0.07
SPG7-213ENST00000566221 PCDH15Q96QU1 1955 aa14.64□□□□□ -0.07
SPG7-213ENST00000566221 EXOC1LA0A1B0GW35 172 aa14.63□□□□□ -0.07
SPG7-213ENST00000566221 VILLO15195 856 aa14.63□□□□□ -0.07
SPG7-213ENST00000566221 KRT37O76014 449 aa14.63□□□□□ -0.07
SPG7-213ENST00000566221 EPN2O95208 641 aa14.63□□□□□ -0.07
SPG7-213ENST00000566221 ASMTLO95671 621 aa14.63□□□□□ -0.07
SPG7-213ENST00000566221 ZNF7P17097 686 aaPredicted RBP14.63□□□□□ -0.07
SPG7-213ENST00000566221 NSG1P42857 185 aa14.63□□□□□ -0.07
SPG7-213ENST00000566221 LEPRP48357 1165 aaKnown RBP14.63□□□□□ -0.07
SPG7-213ENST00000566221 EIF3BP55884 814 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms