RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CDK3Q00526 305 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CACNG1Q06432 222 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 NFATC2Q13469 925 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ITGA9Q13797 1035 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 SPANXN3Q5MJ09 141 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 KIAA0930Q6ICG6 404 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 FAM151BQ6UXP7 276 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 SLC22A18ASQ8N1D0 253 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CCDC197Q8NCU1 140 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 OR4L1Q8NH43 312 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MAGEC3Q8TD91 643 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 PYROXD1Q8WU10 500 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ZNF317Q96PQ6 595 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-206ENST00000565990 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MIR1-1HGQ9H1L0 117 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CENPHQ9H3R5 247 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ASB8Q9H765 288 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A7Q9HAW7 530 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A10Q9HAW8 530 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 UGT1A8Q9HAW9 530 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 CAPN10Q9HC96 672 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
SF3B3-206ENST00000565990 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MOCS1Q9NZB8 636 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 ZC3H7BQ9UGR2 993 aaKnown RBP12.51□□□□□ -0.41
SF3B3-206ENST00000565990 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 SMG5Q9UPR3 1016 aaKnown RBP12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MAD1L1Q9Y6D9 718 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
SF3B3-206ENST00000565990 LRP4O75096 1905 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 PCDH15Q96QU1 1955 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 H0YHG0 523 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 TNFRSF10CO14798 259 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 MAGEC1O60732 1142 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 DNAJC8O75937 253 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 VAPBO95292 243 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 PRAMEF1O95521 474 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 GOT2P00505 430 aaKnown RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 LMNAP02545 664 aaKnown RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SLC4A1P02730 911 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 PCCBP05166 539 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 GSTA2P09210 222 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 MYCLP1P12525 358 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 FOXN2P32314 431 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 NXPH1P58417 271 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 KIAA1024LP59773 190 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 BNC1Q01954 994 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 PTK2BQ14289 1009 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SLC29A2Q14542 456 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 FASTKD3Q14CZ7 662 aaKnown RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 RASA2Q15283 850 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 TEAD4Q15561 434 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 LPAL2Q16609 132 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 HP1BP3Q5SSJ5 553 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 TPRG1LQ5T0D9 272 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 RAET1GQ6H3X3 334 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 CERS6Q6ZMG9 384 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 PIGWQ7Z7B1 504 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 CPLX4Q7Z7G2 160 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 GBP7Q8N8V2 638 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SCG3Q8WXD2 468 aaKnown RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 GLYATL1Q969I3 302 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SCARF2Q96GP6 870 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 MYOCQ99972 504 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 CCDC77Q9BR77 488 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 TRIM39Q9HCM9 518 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SAYSD1Q9NPB0 183 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 AASDHPPTQ9NRN7 309 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
SF3B3-206ENST00000565990 LGALS13Q9UHV8 139 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SLC6A14Q9UN76 642 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 SLC17A4Q9Y2C5 497 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 OR1A2Q9Y585 309 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 KNL1Q8NG31 2342 aa12.5□□□□□ -0.41
SF3B3-206ENST00000565990 TDRD6O60522 2096 aaKnown RBP12.49□□□□□ -0.41
SF3B3-206ENST00000565990 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 IGLV3-16A0A075B6K0 115 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 CD3EAPO15446 510 aaKnown RBP12.49□□□□□ -0.41
SF3B3-206ENST00000565990 LRP3O75074 770 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 SLC25A14O95258 325 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-206ENST00000565990 FUCA1P04066 466 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 CEACAM5P06731 702 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 PAMP19021 973 aa12.49□□□□□ -0.41
SF3B3-206ENST00000565990 ITGALP20701 1170 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms