RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TRABDQ9H4I3 376 aa19.64■□□□□ 0.73
CLN6-206ENST00000565471 PCDHB11Q9Y5F2 797 aa19.64■□□□□ 0.73
CLN6-206ENST00000565471 SPO11Q9Y5K1 396 aa19.64■□□□□ 0.73
CLN6-206ENST00000565471 HACD1B0YJ81 288 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 NFKB1P19838 968 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 CSTF2P33240 577 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLN6-206ENST00000565471 HMGCLP35914 325 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 LLGL1Q15334 1064 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 PPP2R5EQ16537 467 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 KIAA1614Q5VZ46 1190 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 WDR74Q6RFH5 385 aaPredicted RBP19.63■□□□□ 0.73
CLN6-206ENST00000565471 ZC3H18Q86VM9 953 aaKnown RBP19.63■□□□□ 0.73
CLN6-206ENST00000565471 QKIQ96PU8 341 aaKnown RBP eCLIP19.63■□□□□ 0.73
CLN6-206ENST00000565471 VPS35Q96QK1 796 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 FCRL5Q96RD9 977 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 DDA1Q9BW61 102 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.63■□□□□ 0.73
CLN6-206ENST00000565471 ZMYND15Q9H091 742 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 EPB41L1Q9H4G0 881 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 ARFGAP3Q9NP61 516 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 UBP1Q9NZI7 540 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 TMEM9Q9P0T7 183 aa19.63■□□□□ 0.73
CLN6-206ENST00000565471 KLHL8Q9P2G9 620 aaPredicted RBP19.63■□□□□ 0.73
CLN6-206ENST00000565471 AURKAO14965 403 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 VEGFDO43915 354 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 SNX2O60749 519 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 MARCKSL1P49006 195 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 WNT3AP56704 352 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 MANEAQ5SRI9 462 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 ZNF648Q5T619 568 aaPredicted RBP19.62■□□□□ 0.73
CLN6-206ENST00000565471 BBS12Q6ZW61 710 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 CCDC50Q8IVM0 306 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 ZNF567Q8N184 647 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 DTX3LQ8TDB6 740 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 HTR3CQ8WXA8 447 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 SGF29Q96ES7 293 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 CALR3Q96L12 384 aaKnown RBP19.62■□□□□ 0.73
CLN6-206ENST00000565471 KLC4Q9NSK0 619 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 WDR70Q9NW82 654 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 HACD3Q9P035 362 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 CPNE7Q9UBL6 633 aa19.62■□□□□ 0.73
CLN6-206ENST00000565471 SMG1Q96Q15 3661 aaKnown RBP19.62■□□□□ 0.73
CLN6-206ENST00000565471 B4E171 279 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 STMND1H3BQB6 276 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 KMOO15229 486 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 MPSTP25325 297 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 TSPAN7P41732 249 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 TNNT3P45378 269 aaPredicted RBP19.61■□□□□ 0.73
CLN6-206ENST00000565471 MPP3Q13368 585 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 XRCC4Q13426 336 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 NFATC2Q13469 925 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 ZDHHC20Q5W0Z9 365 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 CRTC3Q6UUV7 619 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 PID1Q7Z2X4 250 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 DAAM2Q86T65 1068 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 LRRTM4Q86VH4 590 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 KRT35Q92764 455 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 MRGPRX2Q96LB1 330 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 PANX2Q96RD6 677 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 TIMM29Q9BSF4 260 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 UCK1Q9HA47 277 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 PRDM8Q9NQV8 689 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 TRHDEQ9UKU6 1024 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 TFR2Q9UP52 801 aa19.61■□□□□ 0.73
CLN6-206ENST00000565471 LILRA5A6NI73 299 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 PRR19A6NJB7 356 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 APOC4-APOC2K7ER74 178 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 APOC2P02655 101 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 ZNF7P17097 686 aaPredicted RBP19.6■□□□□ 0.73
CLN6-206ENST00000565471 XRCC1P18887 633 aaPredicted RBP19.6■□□□□ 0.73
CLN6-206ENST00000565471 HLA-DPA1P20036 260 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 FECHP22830 423 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 PPM1FP49593 454 aaPredicted RBP19.6■□□□□ 0.73
CLN6-206ENST00000565471 ARSDP51689 593 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 RAB15P59190 212 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 COPS2P61201 443 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 UBE2IP63279 158 aaKnown RBP19.6■□□□□ 0.73
CLN6-206ENST00000565471 SRSF6Q13247 344 aaKnown RBP19.6■□□□□ 0.73
CLN6-206ENST00000565471 INSCQ1MX18 579 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 SIRPB2Q5JXA9 342 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 ARHGAP22Q7Z5H3 698 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 TTC30BQ8N4P2 665 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 ART4Q93070 314 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 HAUS1Q96CS2 278 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 OXNAD1Q96HP4 312 aaPredicted RBP19.6■□□□□ 0.73
CLN6-206ENST00000565471 MRFAP1L1Q96HT8 127 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 ASPSCR1Q9BZE9 553 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 OSGEPL1Q9H4B0 414 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLN6-206ENST00000565471 TMPRSS11EQ9UL52 423 aa19.6■□□□□ 0.73
CLN6-206ENST00000565471 SDK2Q58EX2 2172 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 CDK14O94921 469 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 CTNNA1P35221 906 aaKnown RBP19.59■□□□□ 0.73
CLN6-206ENST00000565471 ATP1A2P50993 1020 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 SLC1A5Q15758 541 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 ATP13A5Q4VNC0 1218 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 KHDC1Q4VXA5 237 aaKnown RBP19.59■□□□□ 0.73
CLN6-206ENST00000565471 VASH2Q86V25 355 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 ZNF547Q8IVP9 402 aa19.59■□□□□ 0.73
CLN6-206ENST00000565471 BMPERQ8N8U9 685 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms