RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TRPV2Q9Y5S1 764 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SRPRAP08240 638 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 CETPP11597 493 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 RGS19P49795 217 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CYP4F8P98187 520 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZBED5Q49AG3 693 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 MPPE1Q53F39 396 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF410Q86VK4 478 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PCSK9Q8NBP7 692 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 ASB12Q8WXK4 309 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SMG7Q92540 1137 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 MTFMTQ96DP5 389 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 TBATAQ96M53 351 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CAMK1GQ96NX5 476 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CIPCQ9C0C6 399 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TRPV4Q9HBA0 871 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 KCNN3Q9UGI6 736 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CYTH4Q9UIA0 394 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SCP2D1Q9UJQ7 156 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF99A8MXY4 864 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 NR2C1P13056 603 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DNASE1L1P49184 302 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CSTF1Q05048 431 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 ASTE1Q2TB18 679 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 NIPA1Q7RTP0 329 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SCUBE3Q8IX30 993 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 BEND7Q8N7W2 519 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 TMEM161BQ8NDZ6 487 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TCF7L1Q9HCS4 588 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CD93Q9NPY3 652 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF70Q9UC06 446 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 TNFSF13BQ9Y275 285 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 M0R233 179 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FFAR3O14843 346 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GPR42O15529 346 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TLX3O43711 291 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 CPNE3O75131 537 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 SLC1A2P43004 574 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GCNT6Q5T4J0 391 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DUPD1Q68J44 220 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FBXL19Q6PCT2 694 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 UNC5AQ6ZN44 842 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 C1orf186Q6ZWK4 172 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 HIST1H2AAQ96QV6 131 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CNPPD1Q9BV87 410 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 NELFAQ9H3P2 528 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TMEM27Q9HBJ8 222 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LRTM1Q9HBL6 345 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LYARQ9NX58 379 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 IGSF9Q9P2J2 1179 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FETUBQ9UGM5 382 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DNMT3LQ9UJW3 386 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PLLPQ9Y342 182 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 TRIM64A6NGJ6 449 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CTSHP09668 335 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SLC5A3P53794 718 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 STXBP1P61764 594 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 PRR5P85299 388 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF181Q2M3W8 571 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SYVN1Q86TM6 617 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PARP8Q8N3A8 854 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FBXL16Q8N461 479 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GSTCDQ8NEC7 633 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DNERQ8NFT8 737 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF700Q9H0M5 742 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PCBD2Q9H0N5 130 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ALG2Q9H553 416 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ASB7Q9H672 318 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF358Q9NW07 568 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IQGAP1P46940 1657 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CAPN8A6NHC0 703 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TSTD3H0UI37 97 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PDPK1O15530 556 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 MICAL2O94851 1124 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PRAMEF12O95522 483 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GADD45AP24522 165 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 BAIAP2L2Q6UXY1 529 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 KCTD8Q6ZWB6 473 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CYP2U1Q7Z449 544 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TRABD2AQ86V40 505 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TNS4Q8IZW8 715 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TAS1R2Q8TE23 839 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF431Q8TF32 576 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF570Q96NI8 536 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IFT27Q9BW83 186 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CHIAQ9BZP6 476 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 MROH8Q9H579 483 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 BRD9Q9H8M2 597 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PADI2Q9Y2J8 665 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DISC1C4P0D8 188 aa5.05□□□□□ -1.6
SMG1-211ENST00000565324 NCK1P16333 377 aa5.05□□□□□ -1.6
SMG1-211ENST00000565324 RPS12P25398 132 aaKnown RBP5.05□□□□□ -1.6
SMG1-211ENST00000565324 CREMQ03060 361 aa5.05□□□□□ -1.6
SMG1-211ENST00000565324 MVKQ03426 396 aa5.05□□□□□ -1.6
SMG1-211ENST00000565324 LAMTOR4Q0VGL1 99 aa5.05□□□□□ -1.6
SMG1-211ENST00000565324 IQCCQ4KMZ1 466 aa5.05□□□□□ -1.6
SMG1-211ENST00000565324 FOXR1Q6PIV2 292 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms