RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GALPQ9UBC7 116 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 IKZF3Q9UKT9 509 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 A0A1W2PP18 115 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PCYT1AP49585 367 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CD47Q08722 323 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 OXA1LQ15070 435 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PRAMEF19Q5SWL8 479 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TAF2Q6P1X5 1199 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 C14orf80Q86SX3 495 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CLIP4Q8N3C7 705 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 B3GALT6Q96L58 329 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PDE10AQ9Y233 779 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GIT1Q9Y2X7 761 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SNX5Q9Y5X3 404 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 BBIP1A8MTZ0 92 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PSMD11O00231 422 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 JRKO75564 520 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CPNE6O95741 557 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 FCGR1AP12314 374 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 FMO3P31513 532 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DAG1Q14118 895 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RBBP7Q16576 425 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NOTUMQ6P988 496 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RAB44Q7Z6P3 723 aaPredicted RBP20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZDHHC13Q8IUH4 622 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 OR13C4Q8NGS5 318 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF560Q96MR9 790 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SMIM14Q96QK8 99 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF347Q96SE7 839 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CYP2S1Q96SQ9 504 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 AMBRA1Q9C0C7 1298 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ATP13A3Q9H7F0 1226 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 LIMD1Q9UGP4 676 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SEPT3Q9UH03 358 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MYLKQ15746 1914 aa20.34■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TANC1Q9C0D5 1861 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PAGE1O75459 146 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 S1PR4O95977 384 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 IDO1P14902 403 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SERPINH1P50454 418 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NCS1P62166 190 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC10A7Q0GE19 358 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GRSF1Q12849 480 aaKnown RBP eCLIP20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 KCNAB2Q13303 367 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 KYAT1Q16773 422 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF549Q6P9A3 640 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 BNIPLQ7Z465 357 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DNAJB3Q8WWF6 145 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RPL3LQ92901 407 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NTAN1Q96AB6 310 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ENTPD7Q9NQZ7 604 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SUN2Q9UH99 717 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NRCAMQ92823 1304 aa20.33■□□□□ 0.85
MAP1LC3B-206ENST00000564844 A0A0U1RQS6 177 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SYCE1LA8MT33 242 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 G3V2T6 193 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CDC7O00311 574 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLC22A3O75751 556 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MTHFD2P13995 350 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NR4A2P43354 598 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GSSP48637 474 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PIK3CGP48736 1102 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CLCN5P51795 746 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 POLR2JP52435 117 aaKnown RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DMPKQ09013 629 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TRIM32Q13049 653 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SIM2Q14190 667 aaPredicted RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TSNQ15631 228 aaKnown RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DCAF4L1Q3SXM0 396 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PRMT9Q6P2P2 845 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLC16A12Q6ZSM3 486 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 OR2T11Q8NH01 316 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.33■□□□□ 0.842e-6■■■■■ 54.9
MAP1LC3B-206ENST00000564844 FCRL2Q96LA5 508 aaPredicted RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MYOCQ99972 504 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PAAF1Q9BRP4 392 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 C16orf70Q9BSU1 422 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SARS2Q9NP81 518 aaKnown RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PAK1IP1Q9NWT1 392 aaPredicted RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RBPJLQ9UBG7 517 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ASB1Q9Y576 335 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GPR45Q9Y5Y3 372 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 KATNA1O75449 491 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CST1P01037 141 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CD1DP15813 335 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ADRA1AP35348 466 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 C6orf141Q5SZD1 244 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TXNDC11Q6PKC3 985 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TERB1Q8NA31 727 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 OR7A2PQ8NGA2 310 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CAPSLQ8WWF8 208 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TSPAN17Q96FV3 270 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FEM1AQ9BSK4 669 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TMEM9Q9P0T7 183 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SPATA7Q9P0W8 599 aa20.33■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MITFO75030 526 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FTH1P02794 183 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ALPLP05186 524 aa20.32■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FMO4P31512 558 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms