RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 UBE2IP63279 158 aaKnown RBP23.57■■□□□ 1.36
NME3-206ENST00000564252 CDK18Q07002 472 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 SLC14A2Q15849 920 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 PCSK7Q16549 785 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 LRRC38Q5VT99 294 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 ADGRG6Q86SQ4 1221 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 TRAM1L1Q8N609 369 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 GLYATL1Q969I3 302 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 EPB41L1Q9H4G0 881 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 RAD18Q9NS91 495 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 KLC4Q9NSK0 619 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 SPTLC3Q9NUV7 552 aa23.57■■□□□ 1.36
NME3-206ENST00000564252 ZNHIT6Q9NWK9 470 aaKnown RBP23.57■■□□□ 1.36
NME3-206ENST00000564252 LILRA5A6NI73 299 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 GPR89AB7ZAQ6 455 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 CHUKO15111 745 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 SLC4A1P02730 911 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 KRT1P04264 644 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 GPR89BP0CG08 455 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 ZFXP17010 805 aaPredicted RBP23.56■■□□□ 1.36
NME3-206ENST00000564252 NFKB2Q00653 900 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 PDPK2PQ6A1A2 396 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 B4GALNT4Q76KP1 1039 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 RFX6Q8HWS3 928 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 RHOT2Q8IXI1 618 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 AVL9Q8NBF6 648 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 SPATA22Q8NHS9 363 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 PLEKHG4BQ96PX9 1271 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 CTRCQ99895 268 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 FBXO8Q9NRD0 319 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 ABHD10Q9NUJ1 306 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 SCHIP1Q9P0W5 487 aaPredicted RBP23.56■■□□□ 1.36
NME3-206ENST00000564252 SLC23A2Q9UGH3 650 aa23.56■■□□□ 1.36
NME3-206ENST00000564252 UBR5O95071 2799 aaPredicted RBP23.55■■□□□ 1.36
NME3-206ENST00000564252 WISP1O95388 367 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 MT-CYBP00156 380 aaPredicted RBP23.55■■□□□ 1.36
NME3-206ENST00000564252 DYNLT1P63172 113 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 CRTC3Q6UUV7 619 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 CEACAM20Q6UY09 585 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 RNF25Q96BH1 459 aaPredicted RBP23.55■■□□□ 1.36
NME3-206ENST00000564252 GPR63Q9BZJ6 419 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 OSGEPL1Q9H4B0 414 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 CLMPQ9H6B4 373 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 NHEJ1Q9H9Q4 299 aaPredicted RBP23.55■■□□□ 1.36
NME3-206ENST00000564252 UCK1Q9HA47 277 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 GLOD4Q9HC38 313 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 APMAPQ9HDC9 416 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 GEMIN8Q9NWZ8 242 aaKnown RBP23.55■■□□□ 1.36
NME3-206ENST00000564252 KLHL3Q9UH77 587 aa23.55■■□□□ 1.36
NME3-206ENST00000564252 MN1Q10571 1320 aaPredicted RBP23.55■■□□□ 1.36
NME3-206ENST00000564252 PRR19A6NJB7 356 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 CBFA2T2O43439 604 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 NDST3O95803 873 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 BPIP17213 487 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 XRCC1P18887 633 aaPredicted RBP23.54■■□□□ 1.36
NME3-206ENST00000564252 NOP2P46087 812 aaKnown RBP23.54■■□□□ 1.36
NME3-206ENST00000564252 PLA2G4EQ3MJ16 856 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 TEX44Q53QW1 395 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 BORAQ6PGQ7 559 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 MFSD7Q6UXD7 560 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 CCDC42Q96M95 316 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 ZPBPQ9BS86 351 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 OGFRQ9NZT2 677 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 SPO11Q9Y5K1 396 aa23.54■■□□□ 1.36
NME3-206ENST00000564252 AURKAO14965 403 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 MFAP3LO75121 409 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 PPFIA2O75334 1257 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 PTPN3P26045 913 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 KCNC4Q03721 635 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 PRKD1Q15139 912 aaPredicted RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 INSCQ1MX18 579 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 KHDC1Q4VXA5 237 aaKnown RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 TIPARPQ7Z3E1 657 aaKnown RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 LRRTM4Q86VH4 590 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 PLXDC1Q8IUK5 500 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 VSTM4Q8IW00 320 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 RHOT1Q8IXI2 618 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 NLGN4XQ8N0W4 816 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 NLGN4YQ8NFZ3 816 aaPredicted RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 SLC45A3Q96JT2 553 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 TEKT5Q96M29 485 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 TIMM29Q9BSF4 260 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 TRIM4Q9C037 500 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 DDX56Q9NY93 547 aaKnown RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 ZNF624Q9P2J8 865 aaPredicted RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 TMPRSS11EQ9UL52 423 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 HYOU1Q9Y4L1 999 aa23.53■■□□□ 1.36
NME3-206ENST00000564252 TMEM184BQ9Y519 407 aaPredicted RBP23.53■■□□□ 1.36
NME3-206ENST00000564252 A0A0A6YYK5 440 aaPredicted RBP23.52■■□□□ 1.36
NME3-206ENST00000564252 TERTO14746 1132 aaKnown RBP23.52■■□□□ 1.36
NME3-206ENST00000564252 KMOO15229 486 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 SUV39H1O43463 412 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 VEGFDO43915 354 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 MTX2O75431 263 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 C9P02748 559 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 ANKRD34CP0C6C1 535 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 ZNF7P17097 686 aaPredicted RBP23.52■■□□□ 1.36
NME3-206ENST00000564252 MAP4P27816 1152 aaKnown RBP23.52■■□□□ 1.36
NME3-206ENST00000564252 SLC19A1P41440 591 aa23.52■■□□□ 1.36
NME3-206ENST00000564252 SLC1A1P43005 524 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms