RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 ZNF189O75820 626 aaPredicted RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 IFNB1P01574 187 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 PNLIPP16233 465 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 LPOP22079 712 aaPredicted RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 CA5AP35218 305 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 ACTN2P35609 894 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 LSSP48449 732 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 PDX1P52945 283 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 INHBCP55103 352 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 TMEM115Q12893 351 aaPredicted RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 TAF1AQ15573 450 aaPredicted RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 INSCQ1MX18 579 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 NKAIN2Q5VXU1 208 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 ZNF398Q8TD17 642 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 SLC37A2Q8TED4 501 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 FGF11Q92914 225 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 LRRC45Q96CN5 670 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 NAF1Q96HR8 494 aaKnown RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 PRDM8Q9NQV8 689 aa15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 PIH1D1Q9NWS0 290 aaKnown RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 RALYQ9UKM9 306 aaKnown RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 KMT2BQ9UMN6 2715 aaPredicted RBP15.4■□□□□ 0.06
AC009088.3-201ENST00000563605 KMOO15229 486 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 LIASO43766 372 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 VEGFDO43915 354 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 RBMS1P29558 406 aaKnown RBP15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 CCDC173Q0VFZ6 552 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 NFATC2Q13469 925 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 GTF2H3Q13889 308 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 SEPT7Q16181 437 aaKnown RBP15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 MAP9Q49MG5 647 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 PHF19Q5T6S3 580 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 ZDHHC20Q5W0Z9 365 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 DENND5AQ6IQ26 1287 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 IYDQ6PHW0 289 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 TMPRSS9Q7Z410 1059 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 LRRTM4Q86VH4 590 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 TRAPPC5Q8IUR0 188 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 LSMEM2Q8N112 164 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 TRIM58Q8NG06 486 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 WDR36Q8NI36 951 aaKnown RBP15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 PPP1R2P1Q96PQ5 205 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 VPS35Q96QK1 796 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 STRADBQ9C0K7 418 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 KCNK4Q9NYG8 393 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 FKBPLQ9UIM3 349 aa15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 URB1O60287 2271 aaKnown RBP15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 ARHGEF17Q96PE2 2063 aaPredicted RBP15.39■□□□□ 0.05
AC009088.3-201ENST00000563605 ACACAQ13085 2346 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 CCDC187A0A096LP49 1063 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 CCL22O00626 93 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 CHUKO15111 745 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 ZW10O43264 779 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 TNFSF15O95150 251 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 CRTAMO95727 393 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 HGFP14210 728 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 ETS1P14921 441 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 ZNF7P17097 686 aaPredicted RBP15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 MPSTP25325 297 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 CD1CP29017 333 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 CXCR5P32302 372 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 EIF2S3P41091 472 aaKnown RBP15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 TBC1D25Q3MII6 688 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 RAB11FIP2Q7L804 512 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 PIM3Q86V86 326 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 ZNF547Q8IVP9 402 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 SFRP1Q8N474 314 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 FBXO39Q8N4B4 442 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 OR13C4Q8NGS5 318 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 BRSK1Q8TDC3 778 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 NAT14Q8WUY8 206 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 GRAMD1AQ96CP6 724 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 TMEM74Q96NL1 305 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 SLC38A3Q99624 504 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 NUDT22Q9BRQ3 303 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 ZMYND15Q9H091 742 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 SEMA6CQ9H3T2 930 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 FAM96AQ9H5X1 160 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 ASB8Q9H765 288 aa15.38■□□□□ 0.05
AC009088.3-201ENST00000563605 PDZK1P1A8MUH7 402 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 TMX2-CTNND1H3BSU7 103 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 RRP8O43159 456 aaKnown RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 CEP104O60308 925 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 PPFIA2O75334 1257 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 PRAMEF1O95521 474 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 CPNE6O95741 557 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 RPL10P27635 214 aaKnown RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 ITPKBP27987 946 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 AKT1P31749 480 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 STIP1P31948 543 aaKnown RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 MAPK9P45984 424 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 GPR3P46089 330 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 LMAN1P49257 510 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 MSLNQ13421 630 aaPredicted RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 ITGA9Q13797 1035 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 SEPT6Q14141 434 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms