RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ANKRD11Q6UB99 2663 aaPredicted RBP27.95■■■□□ 2.06
NME3-203ENST00000563367 TRBV23OR9-2A0A075B6M9 112 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 GPR89AB7ZAQ6 455 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 VEGFDO43915 354 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 FGGP02679 453 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 GPR89BP0CG08 455 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 ETS1P14921 441 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 ZNF438Q7Z4V0 828 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 GLIS1Q8NBF1 620 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 ATXN7L3BQ96GX2 97 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 GFM1Q96RP9 751 aaKnown RBP27.94■■■□□ 2.06
NME3-203ENST00000563367 LRRC40Q9H9A6 602 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 SLC23A2Q9UGH3 650 aa27.94■■■□□ 2.06
NME3-203ENST00000563367 FEZ2Q9UHY8 353 aaPredicted RBP27.94■■■□□ 2.06
NME3-203ENST00000563367 URB1O60287 2271 aaKnown RBP27.93■■■□□ 2.06
NME3-203ENST00000563367 A0A1W2PNU3 283 aaPredicted RBP27.93■■■□□ 2.06
NME3-203ENST00000563367 PPM1DO15297 605 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 B4GAT1O43505 415 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 CEP104O60308 925 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 CDK14O94921 469 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 AP2A1O95782 977 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 IFNB1P01574 187 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 TPH1P17752 444 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 B4GALNT1Q00973 533 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 TMEM115Q12893 351 aaPredicted RBP27.93■■■□□ 2.06
NME3-203ENST00000563367 CCNG2Q16589 344 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 ZNF547Q8IVP9 402 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 OR13C4Q8NGS5 318 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 GDAP1Q8TB36 358 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 LRRC45Q96CN5 670 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 ETNK1Q9HBU6 452 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 PIH1D1Q9NWS0 290 aaKnown RBP27.93■■■□□ 2.06
NME3-203ENST00000563367 FKBPLQ9UIM3 349 aa27.93■■■□□ 2.06
NME3-203ENST00000563367 ATXN7L1Q9ULK2 861 aaPredicted RBP27.93■■■□□ 2.06
NME3-203ENST00000563367 RHPN2P1A8MT19 583 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 D6RAR5 112 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 PSMD3O43242 534 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 LDB2O43679 373 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 CRTAMO95727 393 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 ZNF140P52738 457 aaPredicted RBP27.92■■■□□ 2.06
NME3-203ENST00000563367 OR1D5P58170 312 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 PLA2G4EQ3MJ16 856 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 B3GNT8Q7Z7M8 397 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 ZNF398Q8TD17 642 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 KLC4Q9NSK0 619 aa27.92■■■□□ 2.06
NME3-203ENST00000563367 A6NCN8 305 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 KMOO15229 486 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 BRINP1O60477 761 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 PRAMEF1O95521 474 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 MPOP05164 745 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 TMPRSS15P98073 1019 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 XIAPP98170 497 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 ITGA9Q13797 1035 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 NR1D2Q14995 579 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 GPRC6AQ5T6X5 926 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 LRRTM4Q86VH4 590 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 SFRP1Q8N474 314 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 SLC37A2Q8TED4 501 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 RAXQ9Y2V3 346 aa27.91■■■□□ 2.06
NME3-203ENST00000563367 CELSR3Q9NYQ7 3312 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 CCL22O00626 93 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 SNX2O60749 519 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 ZSCAN5DPP0CG00 497 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 ZNF7P17097 686 aaPredicted RBP27.9■■■□□ 2.06
NME3-203ENST00000563367 CLCNKAP51800 687 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 DRICH1Q6PGQ1 229 aaPredicted RBP27.9■■■□□ 2.06
NME3-203ENST00000563367 MICALCLQ6ZW33 695 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 TMPRSS9Q7Z410 1059 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 RASGEF1AQ8N9B8 481 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 DDHD1Q8NEL9 900 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 FOXP3Q9BZS1 431 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 PRDM8Q9NQV8 689 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 SMOXQ9NWM0 555 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 ZKSCAN5Q9Y2L8 839 aa27.9■■■□□ 2.06
NME3-203ENST00000563367 SRP72O76094 671 aaKnown RBP27.89■■■□□ 2.06
NME3-203ENST00000563367 ALDH4A1P30038 563 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 GABREP78334 506 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 PDE1BQ01064 536 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 LONRF2Q1L5Z9 754 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 LDLRAP1Q5SW96 308 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 IYDQ6PHW0 289 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 C11orf96Q7Z7L8 435 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 MAIP1Q8WWC4 291 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 GRAMD1AQ96CP6 724 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 PDLIM2Q96JY6 352 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 SATB2Q9UPW6 733 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 DRG1Q9Y295 367 aaKnown RBP27.89■■■□□ 2.06
NME3-203ENST00000563367 JRKLQ9Y4A0 524 aa27.89■■■□□ 2.06
NME3-203ENST00000563367 PMS2P1A4D2B8 440 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 PRR19A6NJB7 356 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 KRT37O76014 449 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 F3P13726 295 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 RPL22P35268 128 aaKnown RBP27.88■■■□□ 2.05
NME3-203ENST00000563367 FDFT1P37268 417 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 FASLGP48023 281 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 BIRC2Q13490 618 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 POU6F1Q14863 301 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 INSCQ1MX18 579 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 AMZ1Q400G9 498 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 TRAPPC5Q8IUR0 188 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms