RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ASPDHA6ND91 283 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 C2orf81A6NN90 581 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 PKMP14618 531 aaKnown RBP12.98□□□□□ -0.33
USB1-207ENST00000563149 TACR2P21452 398 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 OXTRP30559 389 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 RANBP1P43487 201 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 RPS9P46781 194 aaKnown RBP12.98□□□□□ -0.33
USB1-207ENST00000563149 GPR15P49685 360 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
USB1-207ENST00000563149 TSNQ15631 228 aaKnown RBP12.98□□□□□ -0.33
USB1-207ENST00000563149 PAGE3Q5JUK9 113 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 USP51Q70EK9 711 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 SYVN1Q86TM6 617 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 EGFL6Q8IUX8 553 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 HID1Q8IV36 788 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 DPP10Q8N608 796 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 TRPV1Q8NER1 839 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 DNAJB14Q8TBM8 379 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 TUBA1CQ9BQE3 449 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 HGH1Q9BTY7 390 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 NPLQ9BXD5 320 aaPredicted RBP12.98□□□□□ -0.33
USB1-207ENST00000563149 SEZ6LQ9BYH1 1024 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 MAGEL2Q9UJ55 1249 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 MED16Q9Y2X0 877 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 GBF1Q92538 1859 aa12.98□□□□□ -0.33
USB1-207ENST00000563149 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 F5H5T6 163 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 F8W810 466 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 ARNTLO00327 626 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TULP3O75386 442 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 GNAO1P09471 354 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CHRM3P20309 590 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TTPAP49638 278 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 RAB15P59190 212 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 ADARB1P78563 741 aaKnown RBP12.97□□□□□ -0.33
USB1-207ENST00000563149 NANOGP8Q6NSW7 305 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 ZFAND4Q86XD8 727 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CYGBQ8WWM9 190 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 C12orf43Q96C57 262 aaKnown RBP12.97□□□□□ -0.33
USB1-207ENST00000563149 SPATA17Q96L03 361 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 PSKH2Q96QS6 385 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 ZNF382Q96SR6 550 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 GPR21Q99679 349 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 NANOGQ9H9S0 305 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TMEM9Q9P0T7 183 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 FAM50BQ9Y247 325 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TIMM22Q9Y584 194 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 OR6C75A6NL08 312 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CDC7O00311 574 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 BTN3A1O00481 513 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 EI24O14681 340 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TPST1O60507 370 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 PFDN1O60925 122 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TBX18O95935 607 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CDH1P12830 882 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CYBAP13498 195 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 UGT1A6P19224 532 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 DCKP27707 260 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 GRK4P32298 578 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 UFM1P61960 85 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 PRKG2Q13237 762 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 RBBP7Q16576 425 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TBC1D25Q3MII6 688 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CYBRD1Q53TN4 286 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 RABL3Q5HYI8 236 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 FAM219BQ5XKK7 198 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 UGT3A1Q6NUS8 523 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 GPRIN3Q6ZVF9 776 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 GLT6D1Q7Z4J2 308 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 MIB1Q86YT6 1006 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 GALNT13Q8IUC8 556 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 HOMEZQ8IX15 550 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 LRRC43Q8N309 656 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 OR4K2Q8NGD2 314 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 RNF217Q8TC41 542 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 BPIFB1Q8TDL5 484 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 ISG20Q96AZ6 181 aaKnown RBP12.97□□□□□ -0.33
USB1-207ENST00000563149 BIRC7Q96CA5 298 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 CINPQ9BW66 212 aaPredicted RBP12.97□□□□□ -0.33
USB1-207ENST00000563149 CXorf21Q9HAI6 301 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 HEBP1Q9NRV9 189 aa12.97□□□□□ -0.33
USB1-207ENST00000563149 TRMT6Q9UJA5 497 aaKnown RBP12.97□□□□□ -0.33
USB1-207ENST00000563149 A0A1B0GTL3 188 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 NPEPPSL1A6NEC2 478 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 TRIM64BA6NI03 449 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 INSIG1O15503 277 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 GJB3O75712 270 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 BAIAP3O94812 1187 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 C1RP00736 705 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 PIRTP0C851 137 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 MTHFD1P11586 935 aaKnown RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 LPOP22079 712 aaPredicted RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 HOXD9P28356 352 aaPredicted RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 HMOX2P30519 316 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 HLCSP50747 726 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms