RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TDP1Q9NUW8 608 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 PRPF19Q9UMS4 504 aaKnown RBP11.54□□□□□ -0.56
PCAT1-202ENST00000561978 ZNF510Q9Y2H8 683 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 MYOFQ9NZM1 2061 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 VPS13AQ96RL7 3174 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 HEPACAM2A8MVW5 462 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 BUD23O43709 281 aaKnown RBP11.54□□□□□ -0.56
PCAT1-202ENST00000561978 TBL1XO60907 577 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 SLC4A1P02730 911 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 PYGLP06737 847 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 PIRTP0C851 137 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CD1DP15813 335 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 ITGAXP20702 1163 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 DDX6P26196 483 aaKnown RBP eCLIP11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CCR10P46092 362 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 TTPAP49638 278 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 ATP6V0D1P61421 351 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 PDCD2Q16342 344 aaPredicted RBP11.54□□□□□ -0.56
PCAT1-202ENST00000561978 MUM1Q2TAK8 710 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CXorf57Q6NSI4 855 aaKnown RBP11.54□□□□□ -0.56
PCAT1-202ENST00000561978 ZNF549Q6P9A3 640 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 TMEM207Q6UWW9 146 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CUZD1Q86UP6 607 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 FBXW8Q8N3Y1 598 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 PHF21BQ96EK2 531 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 NAF1Q96HR8 494 aaKnown RBP11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CLPTM1LQ96KA5 538 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 SHCBP1LQ9BZQ2 653 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 ZNF385DQ9H6B1 395 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CYP4F12Q9HCS2 524 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 BCAP29Q9UHQ4 241 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 CPQQ9Y646 472 aa11.54□□□□□ -0.56
PCAT1-202ENST00000561978 HELZP42694 1942 aaKnown RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 NEMP2A6NFY4 417 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 NVLO15381 856 aaKnown RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 RHOBTB1O94844 696 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 TMCC1O94876 653 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 PRLP01236 227 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 HNRNPLP14866 589 aaKnown RBP eCLIP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ZNF37AP17032 561 aaPredicted RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 CD9P21926 228 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 RGRP47804 291 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 SGSHP51688 502 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 HERVK_113P63132 956 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ARF5P84085 180 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 TBL3Q12788 808 aaKnown RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 MAPRE2Q15555 327 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 AARS2Q5JTZ9 985 aaKnown RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ZNF678Q5SXM1 525 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 NCEH1Q6PIU2 408 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 LRRC74BQ6ZQY2 392 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 CARNMT1Q8N4J0 409 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 NKAPQ8N5F7 415 aaKnown RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 LPCAT1Q8NF37 534 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 STAG3L4Q8TBR4 150 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 DNAJC9Q8WXX5 260 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ELSPBP1Q96BH3 223 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ZFYVE19Q96K21 471 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 KCNK17Q96T54 332 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 FEM1AQ9BSK4 669 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ERVK-6Q9BXR3 956 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 EFCAB1Q9HAE3 211 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 MEAF6Q9HAF1 191 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ZBTB26Q9HCK0 441 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ACSS2Q9NR19 701 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 LSM7Q9UK45 103 aaKnown RBP11.53□□□□□ -0.56
PCAT1-202ENST00000561978 TRAF6Q9Y4K3 522 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 ACTL7AQ9Y615 435 aa11.53□□□□□ -0.56
PCAT1-202ENST00000561978 SYCE1LA8MT33 242 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 SDHDO14521 159 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 STX7O15400 261 aaKnown RBP11.52□□□□□ -0.56
PCAT1-202ENST00000561978 ECI2O75521 394 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 ZMPSTE24O75844 475 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 SRP72O76094 671 aaKnown RBP11.52□□□□□ -0.56
PCAT1-202ENST00000561978 SUPT7LO94864 414 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 OLFM2O95897 454 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 ACADSP16219 412 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 PSMC3P17980 439 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 ATP6V1C1P21283 382 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 INHBCP55103 352 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 SULT2A1Q06520 285 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 RAD51Q06609 339 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 TDGQ13569 410 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 SEMA3AQ14563 771 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 PTPRCAPQ14761 206 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 ADGRG6Q86SQ4 1221 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 METTL3Q86U44 580 aaKnown RBP11.52□□□□□ -0.56
PCAT1-202ENST00000561978 CELF5Q8N6W0 485 aaKnown RBP11.52□□□□□ -0.56
PCAT1-202ENST00000561978 MDGA1Q8NFP4 955 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 LPGAT1Q92604 370 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 EXOC2Q96KP1 924 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 PPP1R36Q96LQ0 422 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 DERL2Q9GZP9 239 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 GSTO2Q9H4Y5 243 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 TRPV4Q9HBA0 871 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 VPS28Q9UK41 221 aa11.52□□□□□ -0.56
PCAT1-202ENST00000561978 TMCO1Q9UM00 188 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms