RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 PCSK7Q16549 785 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 PLA2G4EQ3MJ16 856 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 SLC9A4Q6AI14 798 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 CRTC3Q6UUV7 619 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 TIPARPQ7Z3E1 657 aaKnown RBP11.49□□□□□ -0.57
USP3-220ENST00000561381 ADGRG6Q86SQ4 1221 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 SPATA22Q8NHS9 363 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 IMP4Q96G21 291 aaKnown RBP11.49□□□□□ -0.57
USP3-220ENST00000561381 ZNF830Q96NB3 372 aaPredicted RBP11.49□□□□□ -0.57
USP3-220ENST00000561381 AGAP3Q96P47 875 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 HERPUD2Q9BSE4 406 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 SPRY4Q9C004 299 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 CARD9Q9H257 536 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 OSGEPL1Q9H4B0 414 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 RMI1Q9H9A7 625 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 ZFYVE1Q9HBF4 777 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 KLC4Q9NSK0 619 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
USP3-220ENST00000561381 CPNE7Q9UBL6 633 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 SLC23A2Q9UGH3 650 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 PILRAQ9UKJ1 303 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 BSNQ9UPA5 3926 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 MYO18BQ8IUG5 2567 aa11.49□□□□□ -0.57
USP3-220ENST00000561381 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 KIR2DS5A0A0G2JLQ3 304 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 A0A0G2JNG1 304 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 LOC101059948A0A1B0GTJ6 334 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 RGSL1A5PLK6 1076 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 KIR2DS3K7RE56 304 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 APOL1O14791 398 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 AURKAO14965 403 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 NKX2-8O15522 239 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 SUV39H1O43463 412 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 SLC25A14O95258 325 aaPredicted RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 MT-CYBP00156 380 aaPredicted RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 NOP2P46087 812 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 GFERP55789 205 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 RAB15P59190 212 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 DYNLT1P63172 113 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 UBE2IP63279 158 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 KIR2DS5Q14953 304 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 KHDC1Q4VXA5 237 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 ZNF569Q5MCW4 686 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 TMC3Q7Z5M5 1100 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 NT5DC3Q86UY8 548 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 PHYKPLQ8IUZ5 450 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 SH3KBP1Q96B97 665 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 TADA1Q96BN2 335 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 PLEKHG4BQ96PX9 1271 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 CHP1Q99653 195 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 SLC25A18Q9H1K4 315 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 STN1Q9H668 368 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 TRIM39Q9HCM9 518 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 SPTLC3Q9NUV7 552 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 OGFRQ9NZT2 677 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 TSR3Q9UJK0 312 aaKnown RBP11.48□□□□□ -0.57
USP3-220ENST00000561381 DNAJC16Q9Y2G8 782 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 HYOU1Q9Y4L1 999 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP3-220ENST00000561381 SLC30A1Q9Y6M5 507 aa11.48□□□□□ -0.57
USP3-220ENST00000561381 AKR1B10O60218 316 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 PPFIA2O75334 1257 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 KRT1P04264 644 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 PRKAR1AP10644 381 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 SFTPCP11686 197 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 TNNT1P13805 278 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 SLC2A4P14672 509 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 BPIP17213 487 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 TYRP1P17643 537 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 SLC19A1P41440 591 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 CSRP3P50461 194 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 CLCNKAP51800 687 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 EPHA4P54764 986 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 POLE2P56282 527 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 DCDC1P59894 354 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 CDK18Q07002 472 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 PDK1Q15118 436 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 LLGL1Q15334 1064 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 BORAQ6PGQ7 559 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 ATG14Q6ZNE5 492 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 PTRH1Q86Y79 214 aaKnown RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 RFX6Q8HWS3 928 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 ZNF547Q8IVP9 402 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 NLGN4XQ8N0W4 816 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 TRAM1L1Q8N609 369 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 NLGN4YQ8NFZ3 816 aaPredicted RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 OR8K1Q8NGG5 319 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 GLYATL1Q969I3 302 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 TEFMQ96QE5 360 aaKnown RBP11.47□□□□□ -0.57
USP3-220ENST00000561381 DNAJC7Q99615 494 aa11.47□□□□□ -0.57
USP3-220ENST00000561381 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms