RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 DNAJC28Q9NX36 388 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 IL1RAPL1Q9NZN1 696 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 ATXN10Q9UBB4 475 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 KLQ9UEF7 1012 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 KLF15Q9UIH9 416 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 CRLS1Q9UJA2 301 aa10.18□□□□□ -0.78
LRRC28-221ENST00000561276 PNMA8BQ9ULN7 279 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 V9GYY5 206 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-221ENST00000561276 FRYLO94915 3013 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 LNP1A1A4G5 178 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 DFNA5O60443 496 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 CDK14O94921 469 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 TNFP01375 233 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 MSH3P20585 1137 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ACRV1P26436 265 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SSTR1P30872 391 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 PPARGP37231 505 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ATXN3P54252 364 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 PPARDQ03181 441 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SEMA3AQ14563 771 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 CRYMQ14894 314 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SMAD1Q15797 465 aaKnown RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 LONRF1Q17RB8 773 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ZNF423Q2M1K9 1284 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ALG11Q2TAA5 492 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 KHDC1Q4VXA5 237 aaKnown RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 GPRC6AQ5T6X5 926 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 KCTD16Q68DU8 428 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 NEPROQ6NW34 567 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 IL27RAQ6UWB1 636 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 C3orf62Q6ZUJ4 267 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 MARK2Q7KZI7 788 aaKnown RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 LDB1Q86U70 411 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 PARGQ86W56 976 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SERPINA9Q86WD7 417 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 HID1Q8IV36 788 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 DDHD1Q8NEL9 900 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 OR2I1PQ8NGU4 316 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 OR1E3Q8WZA6 343 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ULK4Q96C45 1275 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 C9orf72Q96LT7 481 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 FMO2Q99518 471 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 TTC1Q99614 292 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 PHACTR1Q9C0D0 580 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 IL21RQ9HBE5 538 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 CYP4F12Q9HCS2 524 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 FGF22Q9HCT0 170 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 PARD6AQ9NPB6 346 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 RXFP3Q9NSD7 469 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 CATSPERZQ9NTU4 200 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 C20orf96Q9NUD7 363 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SMOXQ9NWM0 555 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 VPS18Q9P253 973 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 MARCH4Q9P2E8 410 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ZNHIT2Q9UHR6 403 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 SLC17A4Q9Y2C5 497 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 ZFC3H1O60293 1989 aaKnown RBP10.17□□□□□ -0.78
LRRC28-221ENST00000561276 LAMA1P25391 3075 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 GON4LQ3T8J9 2241 aa10.17□□□□□ -0.78
LRRC28-221ENST00000561276 PRSS38A1L453 326 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CHUKO15111 745 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 SCAMP1O15126 338 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 VEGFDO43915 354 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 NUAK1O60285 661 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 DNAJC6O75061 913 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CER1O95813 267 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CSF2P04141 144 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 FAM153BP0C7A2 387 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 ERVK-10P10266 1014 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CTSEP14091 401 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 ATP1B2P14415 290 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 ZNF8P17098 575 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 JUNDP17535 347 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 AKT1P31749 480 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 ARRB1P49407 418 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 BLKP51451 505 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 HK3P52790 923 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 BNIP3Q12983 259 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CTBP1Q13363 440 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 THOC5Q13769 683 aaKnown RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 KYNUQ16719 465 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 FAM153CQ494X1 144 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 HSP90AA5PQ58FG0 334 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 LYPLAL1Q5VWZ2 237 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 STEAP4Q687X5 459 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 MRNIPQ6NTE8 343 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CERS6Q6ZMG9 384 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CCNI2Q6ZMN8 369 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 PRR23CQ6ZRP0 262 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CAPN12Q6ZSI9 719 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 CEP128Q6ZU80 1094 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 SDCCAG8Q86SQ7 713 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-221ENST00000561276 KCNMB4Q86W47 210 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 MINDY1Q8N5J2 469 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 OTUD6BQ8N6M0 293 aa10.16□□□□□ -0.78
LRRC28-221ENST00000561276 RASGEF1AQ8N9B8 481 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms