RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 KCNJ11Q14654 390 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 TCEA2Q15560 299 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 LONRF1Q17RB8 773 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SPANXN3Q5MJ09 141 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 FNBP1LQ5T0N5 605 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SLC30A9Q6PML9 568 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 DET1Q7L5Y6 550 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 DGLUCYQ7Z3D6 616 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SLC9B2Q86UD5 537 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 TRIM74Q86UV6 250 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 AMZ2Q86W34 360 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SPATS2Q86XZ4 545 aaKnown RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 RBFAQ8N0V3 343 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 MPP5Q8N3R9 675 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 GLIS1Q8NBF1 620 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
TPM1-229ENST00000561242 ZNF548Q8NEK5 533 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 OR2I1PQ8NGU4 316 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SKA2Q8WVK7 121 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 NAT6Q93015 286 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 CXorf40BQ96DE9 158 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SERPINB12Q96P63 405 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 PANX3Q96QZ0 392 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 ORAI3Q9BRQ5 295 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 TRIM51Q9BSJ1 452 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 FAM167BQ9BTA0 163 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 FAM129AQ9BZQ8 928 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 IL21RQ9HBE5 538 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 AKAP7Q9P0M2 348 aaPredicted RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 ZC3H7BQ9UGR2 993 aaKnown RBP10.6□□□□□ -0.71
TPM1-229ENST00000561242 SOX13Q9UN79 622 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 SLC17A4Q9Y2C5 497 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 UNC80Q8N2C7 3258 aa10.6□□□□□ -0.71
TPM1-229ENST00000561242 FAM237BA0A1B0GVD1 139 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CPED1A4D0V7 1026 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 B4DGG1 531 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 LMO7DNF2Z398 122 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 K7ESM1 405 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 EIF3HO15372 352 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM1-229ENST00000561242 CD3EAPO15446 510 aaKnown RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 MAP3K7O43318 606 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 RAD51CO43502 376 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 LDB2O43679 373 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 NUAK1O60285 661 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 DNAJC6O75061 913 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 AP2A2O94973 939 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 TRIM16O95361 564 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 ACP5P13686 325 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CKMT2P17540 419 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 PTGIRP43119 386 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 MAGEA6P43360 314 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 POLD2P49005 469 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 SLC12A2P55011 1212 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 SIM1P81133 766 aaPredicted RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 PDIA2Q13087 525 aaKnown RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 EIF2B5Q13144 721 aaKnown RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 ITIH4Q14624 930 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CDKN3Q16667 212 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 DEFB133Q30KQ1 61 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 GPRC6AQ5T6X5 926 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 RNASEH2BQ5TBB1 312 aaKnown RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 DENND5AQ6IQ26 1287 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 UGT3A1Q6NUS8 523 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 RFLNAQ6ZTI6 216 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 SERPINA9Q86WD7 417 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 LRRC6Q86X45 466 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 NXPE1Q8N323 547 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 MMGT1Q8N4V1 131 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 RAB42Q8N4Z0 105 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 NAT8LQ8N9F0 302 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 DEFB124Q8NES8 71 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 MAPK15Q8TD08 544 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 SAP25Q8TEE9 199 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 ZDHHC1Q8WTX9 485 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 OR1E3Q8WZA6 343 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CFAP36Q96G28 342 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 FOPNLQ96NB1 174 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 TCF12Q99081 682 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 AGAP2Q99490 1192 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 SLC38A3Q99624 504 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CCM2Q9BSQ5 444 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 KIFC1Q9BW19 673 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CARD6Q9BX69 1037 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 LGR4Q9BXB1 951 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 EPB41L5Q9HCM4 733 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 ARFGAP3Q9NP61 516 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 MRPL40Q9NQ50 206 aaKnown RBP10.59□□□□□ -0.71
TPM1-229ENST00000561242 KLC4Q9NSK0 619 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 SYBUQ9NX95 663 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 NSMCE4AQ9NXX6 385 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 ATXN10Q9UBB4 475 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 GNPTGQ9UJJ9 305 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 DNAJC16Q9Y2G8 782 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 KCTD3Q9Y597 815 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 IKBKGQ9Y6K9 419 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 COLEC10Q9Y6Z7 277 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CACNA1IQ9P0X4 2223 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 KMT2EQ8IZD2 1858 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms