RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 TLE1Q04724 770 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 FOXM1Q08050 763 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 PPIDQ08752 370 aaKnown RBP13.22□□□□□ -0.29
PSME1-208ENST00000561059 KCNAB2Q13303 367 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 NOMO1Q15155 1222 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 DEFB109BQ30KR1 87 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 KHDC1Q4VXA5 237 aaKnown RBP13.22□□□□□ -0.29
PSME1-208ENST00000561059 C16orf46Q6P387 395 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 XKR5Q6UX68 686 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 H2AFVQ71UI9 128 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 PHYKPLQ8IUZ5 450 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 NLGN4XQ8N0W4 816 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 NLGN4YQ8NFZ3 816 aaPredicted RBP13.22□□□□□ -0.29
PSME1-208ENST00000561059 FATE1Q969F0 183 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
PSME1-208ENST00000561059 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 TRIB3Q96RU7 358 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 HERPUD2Q9BSE4 406 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 ADGRE3Q9BY15 652 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 SPRY4Q9C004 299 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 CARD9Q9H257 536 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 BPIFA1Q9NP55 256 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 HAUS2Q9NVX0 235 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 UBP1Q9NZI7 540 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 OGFRQ9NZT2 677 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 AMACRQ9UHK6 382 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 PTPN13Q12923 2485 aa13.22□□□□□ -0.29
PSME1-208ENST00000561059 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
PSME1-208ENST00000561059 C3orf70A6NLC5 250 aaPredicted RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 MT-CYBP00156 380 aaPredicted RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 SFTPCP11686 197 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 ZNF28P17035 718 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 F8A1P23610 371 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 OAS2P29728 719 aaKnown RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 SLC19A1P41440 591 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 DRG2P55039 364 aaKnown RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 SH3BP2P78314 561 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 IFI35P80217 286 aaPredicted RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 INSCQ1MX18 579 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 CEACAM20Q6UY09 585 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 RFX6Q8HWS3 928 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 TRIM48Q8IWZ4 208 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 GPR63Q9BZJ6 419 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 SPTLC3Q9NUV7 552 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.29
PSME1-208ENST00000561059 ZNF711Q9Y462 761 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 SPO11Q9Y5K1 396 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.29
PSME1-208ENST00000561059 KIR2DS5A0A0G2JLQ3 304 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 A0A0G2JNG1 304 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 OR52A4PA6NMU1 304 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 PDZK1P1A8MUH7 402 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 KIR2DS3K7RE56 304 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 APOL1O14791 398 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 POLR1CO15160 346 aaPredicted RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 GPR39O43194 453 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 KIF1CO43896 1103 aaKnown RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 PMPCBO75439 489 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 KRT1P04264 644 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 BPIP17213 487 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 CCR10P46092 362 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 CDC20Q12834 499 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 KIR2DS5Q14953 304 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 IGFBP7Q16270 282 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 SLC35G2Q8TBE7 412 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 STARD8Q92502 1023 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 GLYATL1Q969I3 302 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 KIAA1143Q96AT1 154 aaPredicted RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 IMP4Q96G21 291 aaKnown RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 SLC45A3Q96JT2 553 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 TEFMQ96QE5 360 aaKnown RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 EPN3Q9H201 632 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 RMI1Q9H9A7 625 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 FBXO8Q9NRD0 319 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 SIDT1Q9NXL6 827 aaKnown RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 SAE1Q9UBE0 346 aaPredicted RBP13.2□□□□□ -0.3
PSME1-208ENST00000561059 TMPRSS11EQ9UL52 423 aa13.2□□□□□ -0.3
PSME1-208ENST00000561059 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 CAPN5O15484 640 aaPredicted RBP13.19□□□□□ -0.3
PSME1-208ENST00000561059 BUD23O43709 281 aaKnown RBP13.19□□□□□ -0.3
PSME1-208ENST00000561059 RASSF9O75901 435 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 MTA2O94776 668 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 UBXN7O94888 489 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 VIPP01282 170 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 SLC2A4P14672 509 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 BRAFP15056 766 aa13.19□□□□□ -0.3
PSME1-208ENST00000561059 ZNF7P17097 686 aaPredicted RBP13.19□□□□□ -0.3
PSME1-208ENST00000561059 AMD1P17707 334 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms