RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 PQLC1Q8N2U9 271 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 OR6C4Q8NGE1 309 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 OR6B3Q8NGW1 331 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 SHKBP1Q8TBC3 707 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 CAPSLQ8WWF8 208 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC22A18Q96BI1 424 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 FBXL8Q96CD0 374 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 ELP4Q96EB1 424 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 RBM14Q96PK6 669 aaKnown RBP6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 GAD1Q99259 594 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 ADI1Q9BV57 179 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 USP36Q9P275 1121 aaKnown RBP6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 AGO2Q9UKV8 859 aaKnown RBP6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 CPQQ9Y646 472 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 SESN1Q9Y6P5 492 aa6.71□□□□□ -1.33
TSPAN3-209ENST00000560715 A0A1B0GTW7 788 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 EXOC1LA0A1B0GW35 172 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 ILVBLA1L0T0 632 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 WDR91A4D1P6 747 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 XPO1O14980 1071 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SCO2O43819 266 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 TSC22D2O75157 780 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 GMNNO75496 209 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 CST3P01034 146 aaPredicted RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SERPINB2P05120 415 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 MMP2P08253 660 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 PRKCAP17252 672 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 PTPN1P18031 435 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 ADRA1DP25100 572 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 MST1P26927 711 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 BMPR1AP36894 532 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 NPY4RP50391 375 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 P2RX3P56373 397 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 PEX3P56589 373 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 CTBSQ01459 385 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 NIPAL4Q0D2K0 466 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 EPS8Q12929 822 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SEC23BQ15437 767 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SMU1Q2TAY7 513 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 RARS2Q5T160 578 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 C6orf52Q5T4I8 152 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 RINT1Q6NUQ1 792 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 FDX2Q6P4F2 183 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 Q6ZVL8 140 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 BBS12Q6ZW61 710 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 TICAM1Q8IUC6 712 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 C10orf53Q8N6V4 93 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 UBL4BQ8N7F7 174 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 GALNT11Q8NCW6 608 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 OR14C36Q8NHC7 312 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SDCCAG3Q96C92 435 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF486Q96H40 463 aaPredicted RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DOK1Q99704 481 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 AIFM2Q9BRQ8 373 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 HOXD1Q9GZZ0 328 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 TP63Q9H3D4 680 aaPredicted RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC38A10Q9HBR0 1119 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DAPK2Q9UIK4 370 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 PSMD13Q9UNM6 376 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SF3B1O75533 1304 aaKnown RBP eCLIP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 GOLGA8QA0A0J9YX86 632 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 FAM237BA0A1B0GVD1 139 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 GOLGA8OA6NCC3 632 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 A8MU76 341 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 GOLGA8NF8WBI6 632 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 GOLGA8RI6L899 631 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 M0QX08 132 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 CTDSP2O14595 271 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DDHD2O94830 711 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 CYP1A2P05177 515 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 NR4A1P22736 598 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DNAJB1P25685 340 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 IVDP26440 423 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 NDST2P52849 883 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 EPHB3P54753 998 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 ESRRGP62508 458 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 PPP2R2BQ00005 443 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 FKBP3Q00688 224 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 TNFAIP1Q13829 316 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DGKDQ16760 1214 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 CEP78Q5JTW2 689 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 SEL1L2Q5TEA6 688 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 KIAA0408Q6ZU52 694 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 RABEPKQ7Z6M1 372 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF420Q8TAQ5 688 aaPredicted RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 TTC9Q92623 222 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 RAX2Q96IS3 184 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 C17orf80Q9BSJ5 609 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 TTPALQ9BTX7 342 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 HEMGNQ9BXL5 484 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 STN1Q9H668 368 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 LRRC19Q9H756 370 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 RPF2Q9H7B2 306 aaKnown RBP6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 FANCEQ9HB96 536 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNK4Q9NYG8 393 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms