RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 CTSLP07711 333 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 GIMD1P0DJR0 217 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 LPOP22079 712 aaPredicted RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 ATP5DP30049 168 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 HADHAP40939 763 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 ABL2P42684 1182 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 PCBP4P57723 403 aaKnown RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 CLDN2P57739 230 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 GABREP78334 506 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 PRAMEP78395 509 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 TRAF2Q12933 501 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 TAF1AQ15573 450 aaPredicted RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 LONRF1Q17RB8 773 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 ZNF284Q2VY69 593 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 CAPN12Q6ZSI9 719 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 CYS1Q717R9 158 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 GLT6D1Q7Z4J2 308 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 MTERF4Q7Z6M4 381 aaKnown RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 CTAGE3PQ8IX95 158 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 ZNF248Q8NDW4 579 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 OR13H1Q8NG92 308 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 CALML6Q8TD86 181 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
LDLR-212ENST00000560467 HIC2Q96JB3 615 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 KLHL32Q96NJ5 620 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 TTC1Q99614 292 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 GORASP1Q9BQQ3 440 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 KIFC1Q9BW19 673 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 TXLNGYQ9BZA5 131 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 CENPHQ9H3R5 247 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 LRRC4CQ9HCJ2 640 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 PREBQ9HCU5 417 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 CHRAC1Q9NRG0 131 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 RAD18Q9NS91 495 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 DKK3Q9UBP4 350 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 SOX13Q9UN79 622 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 TCAF1Q9Y4C2 921 aa11.73□□□□□ -0.53
LDLR-212ENST00000560467 LY6G6EA0A0G2JKS1 128 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 ERVH48-1M5A8F1 160 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 RASGRF2O14827 1237 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 CSO75390 466 aaKnown RBP11.72□□□□□ -0.53
LDLR-212ENST00000560467 ZNF821O75541 412 aaPredicted RBP11.72□□□□□ -0.53
LDLR-212ENST00000560467 PIAS2O75928 621 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 PIGNO95427 931 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 NUDT17P0C025 328 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 CKMT1AP12532 417 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 PPARGP37231 505 aaPredicted RBP11.72□□□□□ -0.53
LDLR-212ENST00000560467 MSH2P43246 934 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 CHRNA4P43681 627 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 CRADDP78560 199 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 MGAT5Q09328 741 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 ELP6Q0PNE2 266 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 NAB1Q13506 487 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 FRG1Q14331 258 aaKnown RBP11.72□□□□□ -0.53
LDLR-212ENST00000560467 ANKRD20A4Q4UJ75 823 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 ZNF542PQ5EBM4 170 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 ARHGAP40Q5TG30 622 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 SEL1L3Q68CR1 1132 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 ZNF449Q6P9G9 518 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 ZNF534Q76KX8 674 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 SDCCAG8Q86SQ7 713 aaPredicted RBP11.72□□□□□ -0.53
LDLR-212ENST00000560467 SLC22A18ASQ8N1D0 253 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 OTUD6BQ8N6M0 293 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 CHST14Q8NCH0 376 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 OR6P1Q8NGX9 317 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 STYXQ8WUJ0 223 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.72□□□□□ -0.53
LDLR-212ENST00000560467 ARRDC3Q96B67 414 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 APOLD1Q96LR9 279 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 TRIB3Q96RU7 358 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 SEMA4CQ9C0C4 833 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
LDLR-212ENST00000560467 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 RIMKLBQ9ULI2 386 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 U3KQA8 63 aa11.72□□□□□ -0.53
LDLR-212ENST00000560467 TP53BP1Q12888 1972 aaPredicted RBP11.71□□□□□ -0.53
LDLR-212ENST00000560467 HECTD1Q9ULT8 2610 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 A0A0J9YYE9 177 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 TLDC2A0PJX2 215 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 PYCARD-AS1I3L0S3 204 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 J3QKU1 62 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 FZD6O60353 706 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 BANF1O75531 89 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 TRBC1P01850 177 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 INHBAP08476 426 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 PDHA1P08559 390 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 CTPS1P17812 591 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 ITGB7P26010 798 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 SSTR1P30872 391 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 AKT2P31751 481 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 GKP32189 559 aa11.71□□□□□ -0.53
LDLR-212ENST00000560467 TMPRSS3P57727 454 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms