RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 NXPE1Q8N323 547 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 BEND7Q8N7W2 519 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 OR13J1Q8NGT2 312 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 OR6P1Q8NGX9 317 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ART4Q93070 314 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 HDAC10Q969S8 669 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 STAMBPL1Q96FJ0 436 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 SIGLEC10Q96LC7 697 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 AGAP2Q99490 1192 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 TRIM51Q9BSJ1 452 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 TSSK1BQ9BXA7 367 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 LGR4Q9BXB1 951 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 CYP4F12Q9HCS2 524 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ZDHHC3Q9NYG2 299 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 MTRF1LQ9UGC7 380 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 DOLKQ9UPQ8 538 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 SNX24Q9Y343 169 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 RPS6KL1Q9Y6S9 549 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 PCNX2A6NKB5 2137 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ARHGEF17Q96PE2 2063 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 MYO15AQ9UKN7 3530 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 IGLV3-16A0A075B6K0 115 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 OR5K4A6NMS3 321 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 E7ESA3 106 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GOLGA8MH3BSY2 632 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GRID2O43424 1007 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 BUD23O43709 281 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GSTA2P09210 222 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 ZNF7P17097 686 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 ACRV1P26436 265 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 AKT1P31749 480 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 DEKP35659 375 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 PLOD1Q02809 727 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 CUL1Q13616 776 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 CCDC38Q502W7 563 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 PYCR3Q53H96 274 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 PRRT3Q5FWE3 981 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GPRC6AQ5T6X5 926 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 ZCCHC8Q6NZY4 707 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 LAYNQ6UX15 382 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 PACS1Q6VY07 963 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 TAS2R42Q7RTR8 314 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 RBFAQ8N0V3 343 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 EIF1ADQ8N9N8 165 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 FAM181AQ8N9Y4 354 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 ZNF548Q8NEK5 533 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GPR150Q8NGU9 434 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 OR4C6Q8NH72 309 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 GPBAR1Q8TDU6 330 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 OR2M4Q96R27 311 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 TIMM29Q9BSF4 260 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 TRIM31Q9BZY9 425 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 CARS2Q9HA77 564 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 FGF22Q9HCT0 170 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 CATSPERZQ9NTU4 200 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 PIH1D1Q9NWS0 290 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 SYBUQ9NX95 663 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 ZNHIT2Q9UHR6 403 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 MOSPD1Q9UJG1 213 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 SUFUQ9UMX1 484 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 FNDC3AQ9Y2H6 1198 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 KCTD3Q9Y597 815 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 MAD1L1Q9Y6D9 718 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 FAM169AQ9Y6X4 670 aa11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-215ENST00000560207 C17orf113A0A1B0GUU1 675 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 CCDC162PA2VCL2 907 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 H3BMM5 538 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 GAPDHSO14556 408 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 CD3EAPO15446 510 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 DNAJC6O75061 913 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 SPAG6O75602 509 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 CEACAM1P13688 526 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 CD59P13987 128 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 OGNP20774 298 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 PMLP29590 882 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 FOXN2P32314 431 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 ADARP55265 1226 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 TMPRSS15P98073 1019 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 THOC5Q13769 683 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 PUM1Q14671 1186 aaKnown RBP eCLIP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 UAP1L1Q3KQV9 507 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 ANKRD20A4Q4UJ75 823 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 BCL7AQ4VC05 210 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 CYS1Q717R9 158 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 RD3Q7Z3Z2 195 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 ADGRG6Q86SQ4 1221 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 NAXDQ8IW45 347 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 IFT20Q8IY31 132 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 PELI3Q8N2H9 469 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 LMX1AQ8TE12 382 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 RHBDD1Q8TEB9 315 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 SETD7Q8WTS6 366 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 OR1E3Q8WZA6 343 aa11.91□□□□□ -0.5
RABGGTA-215ENST00000560207 TSACCQ96A04 125 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms