RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GFPT2O94808 682 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 MBD3O95983 291 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 PYGLP06737 847 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 PDHA1P08559 390 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 AMD1P17707 334 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ERCC2P18074 760 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 NELFEP18615 380 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 XRCC1P18887 633 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 LPOP22079 712 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ITGA1P56199 1179 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 RPS15P62841 145 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF235Q14590 738 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 PLEKHN1Q494U1 663 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ARMC12Q5T9G4 340 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 CACHD1Q5VU97 1274 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 PHF13Q86YI8 300 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 HPS6Q86YV9 775 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 CISD2Q8N5K1 135 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ADAMTS17Q8TE56 1095 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF599Q96NL3 588 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 MGME1Q9BQP7 344 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 CNPY3Q9BT09 278 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 VPS16Q9H269 839 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF624Q9P2J8 865 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 AP4E1Q9UPM8 1137 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 ENTPD4Q9Y227 616 aa12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-213ENST00000560127 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF185O15231 689 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 FOLR1P15328 257 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 HSPA9P38646 679 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 SLC19A1P41440 591 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 NSFP46459 744 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 CAPZBP47756 277 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 STC1P52823 247 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 MAXP61244 160 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 OGDHQ02218 1023 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 CCDC183Q5T5S1 534 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 FAM92BQ6ZTR7 304 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 FCRL4Q96PJ5 515 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 KCTD15Q96SI1 283 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 SMAD5Q99717 465 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 HSD3B7Q9H2F3 369 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 RMI1Q9H9A7 625 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 PDE7BQ9NP56 450 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 SAMSN1Q9NSI8 373 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 RARRES3Q9UL19 164 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 PCM1Q15154 2024 aa12.61□□□□□ -0.39
RABGGTA-213ENST00000560127 A6NL46 340 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 DAPK3O43293 454 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 GRID2O43424 1007 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 FZD6O60353 706 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 TMEM63AO94886 807 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 VIPP01282 170 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 CALB1P05937 261 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 CLCNKAP51800 687 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 PPP1CAP62136 330 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 TUBB3Q13509 450 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 KCNAB1Q14722 419 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 HSP90AA4PQ58FG1 418 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 DNAJC24Q6P3W2 148 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF517Q6ZMY9 492 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 PHYKPLQ8IUZ5 450 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 IQCKQ8N0W5 287 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 GLIS1Q8NBF1 620 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 WDR24Q96S15 920 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 PEBP4Q96S96 227 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 TUBGCP2Q9BSJ2 902 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 KLC4Q9NSK0 619 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 SEMA5BQ9P283 1151 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 SIK3Q9Y2K2 1263 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
RABGGTA-213ENST00000560127 MAP1AP78559 2803 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 A0A0J9YYE9 177 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 FADS2P1A8MWK0 482 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 NUAK1O60285 661 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 TRBC1P01850 177 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF30P17039 623 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 ZNF8P17098 575 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 HNRNPH3P31942 346 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CDK18Q07002 472 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 GPS2Q13227 327 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CLEC16AQ2KHT3 1053 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CRB2Q5IJ48 1285 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 RALGPS1Q5JS13 557 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms