RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TBC1D3GQ6DHY5 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3CQ6IPX1 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3Q8IZP1 549 aaPredicted RBP12.07□□□□□ -0.48
HERC1-205ENST00000559886 DDHD1Q8NEL9 900 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 SLC13A1Q9BZW2 595 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 BTBD1Q9H0C5 482 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
HERC1-205ENST00000559886 SGK2Q9HBY8 427 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 CNOT6Q9ULM6 557 aaKnown RBP12.07□□□□□ -0.48
HERC1-205ENST00000559886 PRR23AA6NEV1 266 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 FAM47DPA6NHR8 397 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 COPEO14579 308 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 PHGDHO43175 533 aaKnown RBP12.06□□□□□ -0.48
HERC1-205ENST00000559886 CRHR1P34998 444 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 CCT5P48643 541 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 PGGT1BP53609 377 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 MTAPQ13126 283 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 WSCD2Q2TBF2 565 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 LDLRAP1Q5SW96 308 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 RAET1GQ6H3X3 334 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 CLDN19Q8N6F1 224 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 EDAQ92838 391 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 SLC17A9Q9BYT1 436 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 VPS11Q9H270 941 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 C10orf142B7Z368 130 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 WISP3O95389 354 aaPredicted RBP12.06□□□□□ -0.48
HERC1-205ENST00000559886 PAK4O96013 591 aaPredicted RBP12.06□□□□□ -0.48
HERC1-205ENST00000559886 PYGLP06737 847 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 DCNP07585 359 aaKnown RBP12.06□□□□□ -0.48
HERC1-205ENST00000559886 RPA3P35244 121 aaPredicted RBP12.06□□□□□ -0.48
HERC1-205ENST00000559886 GPR1P46091 355 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 SGCGQ13326 291 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 ZNF460Q14592 562 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 LRRC14Q15048 493 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
HERC1-205ENST00000559886 MACC1Q6ZN28 852 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 CDHR3Q6ZTQ4 885 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 CCDC91Q7Z6B0 441 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 CLEC14AQ86T13 490 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 OR2T34Q8NGX1 318 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 MDM1Q8TC05 714 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 HEXDCQ8WVB3 486 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 ASB12Q8WXK4 309 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 KCNJ9Q92806 393 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 IER2Q9BTL4 223 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 POPDC3Q9HBV1 291 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 TAS2R13Q9NYV9 303 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 DCDC2Q9UHG0 476 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 GNPTGQ9UJJ9 305 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 ANKRD6Q9Y2G4 727 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 ACOT9Q9Y305 439 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 PRSS21Q9Y6M0 314 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 TECTAO75443 2155 aa12.06□□□□□ -0.48
HERC1-205ENST00000559886 LRRC72A6NJI9 287 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 H3BMM5 538 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 RHOBTB1O94844 696 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 SLC25A14O95258 325 aaPredicted RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 APBB3O95704 486 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 GMPRP36959 345 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 GYS2P54840 703 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PPP2CBP62714 309 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PPP2CAP67775 309 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 KHDC1Q4VXA5 237 aaKnown RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 TMEM31Q5JXX7 168 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PTRHD1Q6GMV3 140 aaKnown RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 PNCKQ6P2M8 343 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 ADAMTSL4Q6UY14 1074 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 TRIM69Q86WT6 500 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PHYKPLQ8IUZ5 450 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 TP53I13Q8NBR0 393 aaPredicted RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 PLA2G15Q8NCC3 412 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 GDAP1Q8TB36 358 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 DENND1AQ8TEH3 1009 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 CENPTQ96BT3 561 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 MUC3AQ02505 3323 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PLXND1Q9Y4D7 1925 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 A0A087X1B8 175 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 TM9SF1O15321 606 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 INPP4BO15327 924 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 GLRA3O75311 464 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 NIPSNAP2O75323 286 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 ZWINTO95229 277 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 TOP3BO95985 862 aaKnown RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 GSTA1P08263 222 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 COL6A2P12110 1019 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 ATP1B2P14415 290 aaPredicted RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 TEAD1P28347 426 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 OXTRP30559 389 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 AKT1P31749 480 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 MAGEA9P43362 315 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 IRF9Q00978 393 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PPARDQ03181 441 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 INSCQ1MX18 579 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 PIM3Q86V86 326 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms