RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 OR51F1A6NGY5 319 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 CHUKO15111 745 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 RAD51CO43502 376 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 VEGFDO43915 354 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 CDK14O94921 469 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 PRSS56P0CW18 603 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 CTBSQ01459 385 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 CKAP4Q07065 602 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 PROX2Q3B8N5 592 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 LDLRAP1Q5SW96 308 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 LVRNQ6Q4G3 990 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 TAF8Q7Z7C8 310 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 PCGF5Q86SE9 256 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 GLRX5Q86SX6 157 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 GKN2Q86XP6 184 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 GALNT13Q8IUC8 556 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 MPP5Q8N3R9 675 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 DDHD1Q8NEL9 900 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 KIF18AQ8NI77 898 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 CNDP2Q96KP4 475 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 OR2M4Q96R27 311 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 XAB2Q9HCS7 855 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 MRFAP1Q9Y605 127 aa20.05■□□□□ 0.8
TSPAN3-207ENST00000559494 TRBV5-4A0A0C4DH59 114 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 FAM187AA6NFU0 413 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 GRID2O43424 1007 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 ALPPL2P10696 532 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 MYF5P13349 255 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 ITGALP20701 1170 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 AK4P27144 223 aaPredicted RBP20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 NMBRP28336 390 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 MAGEA3P43357 314 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 GPR33Q49SQ1 333 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 ZRANB3Q5FWF4 1079 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 PIANPQ8IYJ0 282 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 AGGF1Q8N302 714 aaeCLIP20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 FAM181AQ8N9Y4 354 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 PEX13Q92968 403 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 DUSP23Q9BVJ7 150 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 TRIM31Q9BZY9 425 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 TREX1Q9NSU2 369 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 FTSJ1Q9UET6 329 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 CRLS1Q9UJA2 301 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 SOX13Q9UN79 622 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 DOLKQ9UPQ8 538 aa20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 ZFC3H1O60293 1989 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-207ENST00000559494 SDR42E2A6NKP2 422 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 EFCAB8A8MWE9 144 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 GPR89AB7ZAQ6 455 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 TNFSF14O43557 240 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 GPR89BP0CG08 455 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 CACNG1Q06432 222 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 TUBB2AQ13885 445 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 PPM1JQ5JR12 505 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 CES3Q6UWW8 571 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 CHST15Q7LFX5 561 aaPredicted RBP20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 DGLUCYQ7Z3D6 616 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 MAATS1Q7Z4T9 603 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 HOOK3Q86VS8 718 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 ZNF547Q8IVP9 402 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 NXPE1Q8N323 547 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 PNPLA1Q8N8W4 532 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 RASGEF1AQ8N9B8 481 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 FAM46DQ8NEK8 389 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 ULK4Q96C45 1275 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 CCDC97Q96F63 343 aaPredicted RBP20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 SIGLEC10Q96LC7 697 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 APOLD1Q96LR9 279 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 TUBB2BQ9BVA1 445 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 BOCQ9BWV1 1114 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 GSDMCQ9BYG8 508 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 MRM3Q9HC36 420 aaKnown RBP20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 SPATS2LQ9NUQ6 558 aaKnown RBP20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 SNX24Q9Y343 169 aa20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 COL5A1P20908 1838 aaPredicted RBP20.03■□□□□ 0.8
TSPAN3-207ENST00000559494 LY6G6EA0A0G2JKS1 128 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 TP73O15350 636 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 GOT2P00505 430 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 FOXN2P32314 431 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 RPL21P46778 160 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 CTSCP53634 463 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 ITGA8P53708 1063 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SIM1P81133 766 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 B4GALNT1Q00973 533 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 ILF3Q12906 894 aaKnown RBP eCLIP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 DNAJC3Q13217 504 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 MORF4L2Q15014 288 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 C6orf132Q5T0Z8 1188 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 HIBCHQ6NVY1 386 aaPredicted RBP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 ZCCHC8Q6NZY4 707 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 CRTC3Q6UUV7 619 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 TAS2R42Q7RTR8 314 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SLCO6A1Q86UG4 719 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SERPINA9Q86WD7 417 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SFTPA2Q8IWL1 248 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 OR6P1Q8NGX9 317 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SCG3Q8WXD2 468 aaKnown RBP20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 MFSD3Q96ES6 412 aa20.02■□□□□ 0.8
TSPAN3-207ENST00000559494 SNF8Q96H20 258 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms